Variovorax paradoxus B4: VAPA_1c25330
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Entry
VAPA_1c25330 CDS
T02835
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c25330
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c25330
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AGU49632
UniProt:
T1X9N8
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All DBs
Position
1:complement(2688122..2690278)
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AA seq
718 aa
AA seq
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MTQKQFRSWPLTPVSRAMAAAFLLAAGGAQAQQQTELPAVTVNESNAAPQADVSGFGDVP
LRELPLSATVIDSMQLRTSGARRLADLTQFDSSVTDAYNSAGYWDYLTVRGFVLDNRFNY
RREGLPISAETSIPLDNKERIEILRGTSGIQAGTSAPGGLVNYVVKRPTEQDLRTLRIET
TSRGSVLGALDLGGRFGANHEFGYRLNVANENLKPLTHNLDGNRNMFSLAGDWRITRDSV
LEFEIERSHKTQPSQNGFSLLGSTLPAPVDPRINLNNQPWSQPSEFNALTGSVRFSQALD
ADWRWSAQIGQQRLKTDDRLAYAFGCGAEGNYDRYCSDGTFDFYDFRSENERRTQTAGSL
NLKGNVMTGSVRHELGFGLLASRVRNRFQDQAYNYVGTGNVWATAIVPPDPTLTDANTNR
DERSTELSVQDAIRWNSRFTTWLGVRHTRLDRDSIRTDGSRPTGYKDGITTPWIAASYAI
QPGLLAYASWGKGIESQVVPNKSSQYTNAGEALPALTSRQWELGLKGGSDAFAWQLAWFD
IKRPMTNLDACNRLGTTPCDGRYDGSALHRGLEAGAQWNTGPWRLGGSVTLIDAKRRGST
AEPATNGQSPTNVPKQVLRAQAAYRVTSVPGLEVLGQLSHEGRRNVLPDGSITLPSWTRV
DAVLRYDTRLRGVQTSWSIAIDNLFDRRYWKESPYQFGHIYLFPGAPRTLRLGLSVSL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaagcaattccgatcctggccgctgacgccggtctcgcgtgcaatggctgcc
gctttcctgctggccgccggcggcgcgcaggcccagcagcaaaccgagctgcctgccgtc
acggtgaacgaaagcaatgccgcaccgcaagccgacgtgagcggcttcggcgacgtgccg
ctgcgcgagctgccgctctcggccacggtgatcgacagcatgcagcttcgcacgagcggt
gcgcgccgcctcgcggacctcacgcagttcgactcctcggtgaccgatgcctacaactcg
gccggctactgggactacctgaccgtgcgcggcttcgtgctggacaaccgcttcaactac
cggcgcgagggcttgccgatcagcgccgagacatcgatcccgctcgacaacaaggaacgc
atcgagatcctgcgcggcaccagcggcatccaggccggcaccagtgcaccgggcgggctg
gtcaactacgtggtcaagcggcccaccgagcaggacctgcgcacgctgcgcatcgaaacc
accagccgcggcagcgtgctcggcgcgctcgacctcggcgggcgcttcggtgcaaaccac
gagttcggctatcggctcaacgtggcgaacgaaaacctcaagccgctgacgcacaacctc
gacggcaaccgcaacatgttctcgctggcgggcgactggcgcatcacgcgcgattcggtg
ctcgaattcgaaatcgagcgcagccacaagacgcagccgagccagaacggcttcagcctg
ctgggcagcacgctgcccgcgccggtcgatccaaggatcaacctcaacaaccagccatgg
tcgcagccttcggagttcaacgcgctcaccggcagcgtgcgcttcagccaggcgctcgat
gccgactggcgctggagcgcacagatcggccagcaaaggctcaagaccgatgaccgcctg
gcctacgccttcggctgcggcgccgaaggcaactatgaccgctattgctccgacggcacc
ttcgacttctacgacttccgcagcgagaacgagcggcgcacgcaaacagccggcagcctg
aacctcaagggcaacgtgatgaccggcagcgtgcggcacgagctcggcttcggcctgctc
gcgagccgcgtgcgcaaccgcttccaggaccaggcctacaactacgtcggcaccggcaac
gtctgggccacggccatcgtgccgccggaccccacgctgaccgacgccaacaccaaccgc
gacgaacgctccaccgagctctcggtgcaggacgcgatccgctggaacagccgcttcacc
acctggctcggcgtgcgccacacgcggctcgatcgcgacagcatccgcaccgatggctcg
cgccccaccggctacaaggacggcatcaccacgccatggatcgccgccagctacgccatc
cagccgggcctcctggcctatgcgagctggggcaagggcatcgagtcgcaggtggtaccg
aacaagagttcgcagtacaccaacgcaggcgaggcgctgcctgcactgacctcgcgtcag
tgggaactgggactcaagggcggcagcgacgccttcgcctggcagctcgcgtggttcgac
atcaagcgccccatgacgaatctcgacgcctgcaaccggctcggcaccacgccctgcgac
ggtcgctacgacggcagcgccttgcaccgcgggctcgaggcgggcgcgcaatggaacacg
gggccctggcgccttggcggcagcgtgaccttgatcgacgccaagcgccgcggaagcacc
gccgagcccgccaccaacggccagtcgcccaccaacgtgcccaagcaggtgttgcgcgcg
caagcggcctaccgcgtgacttcggtgcccggactcgaagtgctgggacagctttcgcat
gaaggccggcgcaacgtgctgcccgacggctcgatcactctgccctcatggacgcgcgtc
gatgcagtgctgcgctacgacaccaggctgcgcggcgtccagacgagctggagcatcgcc
atcgacaacctgttcgaccgccgctactggaaggaatcgccctaccagttcggccacatc
tatctctttcccggagcgccgcgcacgctgcggctcggcttgagcgtgtcgctctga
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