KEGG   Variovorax paradoxus B4: VAPA_1c26900
Entry
VAPA_1c26900      CDS       T02835                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VAPA_1c26900
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c26900
Secretion system [BR:vpd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VAPA_1c26900
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: AGU49788
UniProt: T1XB58
LinkDB
Position
1:complement(2856110..2858455)
AA seq 781 aa
MTRTVQVHTALNAEQLKFRAMRGQEGLSQLFEFEVDMVSPSFNLDLKTLLGTSLTVELQD
EGASRFLNGTVVRFELVGRANETGRHYIYRALVQPWLWYLTRTTDCRIFQNKSVPDVLEE
VLGKYGFEYEKRLTGSYRPWEYCVQYQESDFAFVCRLMEHEGIAYHFEHRNGSHLLVLAD
DVGGYGTLPGHATIAYRPRDRVVNAMEPCIDQWRISEQITSGRVMLDDFDFRKSRASLQS
VQQDPKGHDHSTYEVYEWLGGYSENDQGDSYAKIRLQELQCAHELATGHTNVAGMAPGYL
FQMTHCPREADNREYLVTQTRYDLQEPEYSTGGTAESVCEFDFTVLPSNVAYRPARKTPK
PRTNGPQTATVVGPEEIWTDRFGRVKLQFRWDRYGQSDENSSCWVRVSSNWAGANYGTMH
MPRVGQEVIVDFIGGEPDRPIITGRVYNNDQMPPWELPANATASGILTRSSTGGAANQAN
MLRFEDRTGAEQILLHAERNLDVEVEADETHTTDGTRTTLIKGHESATYQSGETRDITAG
AKETITGGDTRDVTGGFSETVQGGVTQTISGGKTRTLSGGLDDTISGGVKLAITGGFNGT
IDGQEIRFVSDGRNDTINTSNNVTVNGPSTTIVTGPTVHTSPDVTFNTTNHIHNTTQHVI
NTSVYNTTSNTYNNLTNNYTNNSVSYTNNYAKSSDWRWFRAGGVGVRISLVGMSFDVWGA
RLQYYAGLNAQIATVKIDTAVFSLKNKPLEVSAKGLAIANKGMLIATGGLAAKFKVLTLV
A
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgacgcgcactgtccaggttcacaccgcactcaacgccgagcagctgaagttccgcgcc
atgcggggacaggaaggcctctcgcagctgttcgagttcgaggtcgacatggtcagcccg
agcttcaatctcgacctgaagacactgctgggcacttcgctcacggtcgaactgcaggac
gaaggcgcatcgcgctttctcaacggcaccgtggtgcgcttcgagctggtgggccgcgcc
aacgaaacgggccgccactacatctaccgtgcgctggtgcagccctggctctggtatctc
acgcgcaccaccgactgccgcattttccagaacaagagcgtgcccgacgtgctcgaagag
gtgctcggcaaatacggcttcgaatacgagaagcgcctcaccggcagctaccggccctgg
gaatactgcgtgcagtaccaggagagcgacttcgccttcgtgtgccgcctcatggagcac
gagggcatcgcctaccacttcgagcaccgcaacggctcgcacctgctggtgctggccgac
gacgtcggcggctacggcaccttgccgggccacgccaccattgcctaccgcccgcgcgac
cgcgtggtgaatgccatggaaccctgcatcgaccagtggcgcatctcggagcagatcacc
tcgggccgcgtgatgctcgacgacttcgacttcaggaagtcgcgcgcctctctccagagc
gtgcagcaggacccgaagggccacgaccattcgacctacgaagtctatgaatggctgggc
ggctacagcgagaacgaccagggcgacagctacgcgaagatccgcctgcaggagctgcag
tgcgcgcacgagctggccacgggccacaccaatgtggccggcatggcgccgggctacctg
ttccagatgacgcactgcccgcgcgaggccgacaaccgcgaatacctcgtcacccagacc
cgctacgacctgcaggagcccgagtactccaccggcggcacggccgaatcggtgtgcgag
ttcgacttcaccgtgctgccctccaacgtggcctaccggcccgcgcgcaagacgcccaag
ccgcgtaccaacggcccgcagaccgccaccgtggtcggccccgaagagatctggaccgac
cgcttcggccgcgtgaagctgcagttccgctgggaccgctacggccagtccgacgagaac
agctcgtgctgggtgcgcgtgtcgagcaactgggccggcgccaactacggcaccatgcac
atgccgcgcgtgggccaggaagtgatcgtcgacttcatcggcggcgaacccgaccgcccg
atcatcaccggccgcgtctacaacaacgaccagatgccgccgtgggagctgccggccaat
gccacggccagcggcatcctcacgcgctccagcaccggcggtgcggccaaccaggccaac
atgctgcgcttcgaggaccgcacgggtgccgagcagatcctgctgcatgccgagcgcaac
ctcgacgtggaggtggaagccgacgaaacgcacaccaccgacggcacccgcaccaccctc
atcaagggccacgaatcggccacctaccagagcggcgagacgcgcgacatcaccgcgggc
gcgaaagaaaccatcaccggcggagacacgcgcgacgtgaccggcggcttcagcgaaacg
gtccagggcggcgtcacgcagaccatctcgggcggcaagacgcgcacgctcagcggcggg
ctggacgacacgatctcgggcggggtgaagcttgcgatcaccggcggcttcaacggcacc
atcgacgggcaggagatccgcttcgtgagcgacggccgcaacgacacgatcaacacctcg
aacaacgtcacggtcaatggcccgtcgaccacgatcgtcaccggcccgacggtccacact
tcgcccgacgtgaccttcaacacgaccaaccacatccacaacacgacgcagcacgtcatc
aacaccagcgtctacaacaccacgtcgaacacctacaacaacctgaccaacaactacacg
aacaactcggtcagctacacgaacaactatgcaaagagcagcgactggcgctggtttcgc
gcgggcggcgtgggggtgcggatcagcctcgtcggcatgtcgttcgacgtatggggggcg
cgcctgcagtactacgcggggctcaacgcacagatcgccacggtgaagatcgacaccgcc
gtcttctcgctgaagaacaagccgctggaggtcagtgcgaagggcctggccatcgcgaac
aaggggatgctcatcgccaccggcggcctcgccgcgaagttcaaggtactgacgcttgtc
gcttga

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