Variovorax paradoxus B4: VAPA_1c26960
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Entry
VAPA_1c26960 CDS
T02835
Name
(GenBank) YceG-like family protein
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpd01011
]
VAPA_1c26960
Enzymes [BR:
vpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
VAPA_1c26960
Peptidoglycan biosynthesis and degradation proteins [BR:
vpd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
VAPA_1c26960
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YceG
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
AGU49794
UniProt:
T1XBV0
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All DBs
Position
1:2863813..2864835
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AA seq
340 aa
AA seq
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MRRFFLTLFLLAALAALGLGAAGLWWVHQPLKLPAPSVDLSVEPGTTPRGVAQAVADTGT
DVQPQMLYFWFRISGQDRQIRAGSYELERGVTPKMLLNVLVRGEEATRSLVLVEGWNIRQ
VRAALAKAEQLKPETVGLPDDALMARLGRPGVHPEGRFFPDTYTYSKGSTDIALLQRAMR
AMDKKLEAAWAARAADLPIQSADQALILASIVEKETGKAKDRSEIAAVFVNRLRAGMPLQ
TDPTVIYGLGTAFDGNLRKKDLLTDTPWNTYTRGGLPPTPIAMPGKAALLAAVQPAQSKS
LYFVSRGDGTSQFSSSLDDHNRAVNRYQRGGGEPKPKVAQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccgcttcttcctcacgcttttcctgctcgccgccctggctgcgctcggcctcggc
gccgccggcctctggtgggtgcatcagccgctcaagctgcccgcgcccagcgtcgatctt
tccgtggagcccggcaccacgccgcgcggcgttgcgcaggcggtcgccgataccggcacc
gacgtgcagccgcagatgctctatttctggttccgcatttcggggcaagaccgccagatc
cgcgccggcagctacgaactggagcgcggcgtcacgcccaagatgctgctcaacgtgctg
gtgcgcggcgaggaggccacccgcagcctggtgctggtcgaaggctggaacatccgccag
gtgcgcgccgcgctcgccaaggccgaacagctcaagcccgaaaccgtcggtctgcccgac
gatgccctgatggccaggctgggccggcccggcgtgcatcccgagggtcgcttcttcccc
gacacctacacctattcgaagggctcgaccgacatcgcgctgctgcagcgtgccatgcgg
gccatggacaagaagctcgaagccgcgtgggccgcccgggcggccgatttgccgatccaa
tcggcggatcaggcgctgatcctggccagcattgtcgaaaaggagacaggaaaagccaag
gaccgctccgagatcgccgccgttttcgtcaaccggctgcgtgccggcatgccgctgcaa
accgaccccaccgtgatctacggcctgggcaccgcgttcgatggcaacctgcgcaagaaa
gacctgctgaccgacacgccctggaacacctacacgcgcggcggcctgccgcccacgccc
atcgccatgccgggcaaggcggcgctgctggcagcggtgcagccggcgcaaagcaagtcg
ctgtacttcgtttcgcgcggcgacggcaccagccagttcagcagttcgctcgacgaccac
aaccgcgcggtcaaccgctatcagcgcggcggcggcgaacccaaaccgaaagtagcgcaa
tga
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