Variovorax paradoxus B4: VAPA_1c27480
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Entry
VAPA_1c27480 CDS
T02835
Name
(GenBank) putative sensor histidine kinase
Organism
vpd
Variovorax paradoxus B4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CHASE3
HATPase_c
HisKA
GAF_2
PDE8A_N
GAF
IFT57
GAS
HATPase_c_3
Fez1
HAUS-augmin3
Mce4_CUP1
Motif
Other DBs
NCBI-ProteinID:
AGU49845
UniProt:
T1XCF1
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Position
1:2917203..2920697
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AA seq
1164 aa
AA seq
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MKTPTAIDPDDFDRLLSRNLKWPLLGGLIGALLFVGLIVFLLLTLSRVEYTDRVTRSAGE
LQRRSTDMETGLRGFLITGEESFLEPYQSALPRIKSDAAALRQLVSDNRQQTERVERIAA
LQEAWNGFAQDLIALRRSGADYPQAVRQGRGKQLRDDMRAEFAAFMDTEEGLRYQRNEEA
NRTAWLVVSVFLLFTLVFTGMVAYFGRRQLMRLSNSYDAVLRDQAAHAERLAQQAWLRSA
QTELVGELVGELNANDLGRKVLAFFSRHLASAVGALYVRERHGTLRRAASYGFSMEAEAS
PQVFSPTQSLVGQAAAERRRMLVEPIQADYLKVNSGLGEMAPAAVLLVPVSSDGIVNGVI
ELGLPGVPDARTNELLDLVAEDIGDSLAAARYREQLQDALAETQQLNEELQVQQEELRTA
NEELEEQSRALRASQAMLENQQAELEQTNSQLSERTEALDQRNAALRRVQRDLEDRADEL
QRASRYKSEFLANMSHELRTPLNSALILAKLLGDNPQGNLSPEQVKFAESIYSSGNDLLV
LINDILDISKVEAGKLEVVVEEVALDKLAQSLESTFGPLAAEKQLAFRMEIRPGVPATLV
TDRHRVEQILKNLLSNAIKFTGSGEVALVVSAAANGGALFAVSDSGIGISPEQKELIFEA
FHQADGTTSRRYGGTGLGLSISRDLTRLLGGTLAVQSQPGQGSTFTLQLPAAAPQASQQA
AQAPAPAPAKSAAVRTPFPAAHAAPAAPVPPVAVPPPSFADDRTMPPDQVRRVLVIEDEP
QFAHILYDLAHELGYRCLVAHGAADGFELAHQFLPDAILLDMRLPDSTGLGLLQRLKDSP
QTRHIPIHVVSAADDAQAAALHMGAIGYAQKPATRAELMQVFARLEEKLAQKVKAVLLVE
DDALQRESVIRLIGDQDIEIAAVGSGEEALELLRRRVFDCMITDLHLPDMQGSELLKRMA
SEEIVSFPPVIVYTGRNLTRDEEAELQRYSRSIIIKGARSPERLLDEVTLFLHKVEAELS
SERQGMLKAARGRDRIFEGRTILLVDDDVRNLFALTSALEQRGASVEIGRNGREALEKLD
QAREIDLVLMDVMMPEMDGLEATRRLRADPRFEKLPVIAITAKAMKDDREQCLAAGASDY
LAKPVDLERLFSLLRVWMPKMERL
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccgaccgcgatcgaccccgacgacttcgaccgcctgctgagccgcaacctg
aagtggccgctgcttggcggcctgatcggcgccctgctgttcgtcggcctgatcgtgttt
ttgctgctgaccctcagccgggtcgagtacaccgatcgcgtgacgcgcagtgccggcgag
ctgcagcgccgcagcaccgatatggaaacgggcctgcgcggtttcctgatcaccggcgag
gagagctttctcgagccctaccagagcgcgctgccaagaatcaagagcgatgccgcggcg
ctgcggcagctggtgtctgacaaccggcagcagacggagcgggtcgagcgcatcgcggcg
ctccaggaagcctggaacggatttgcgcaagacctgatcgccttgcgccgctcgggcgcc
gactacccgcaggcggtgcggcaaggccggggcaagcagctgcgcgacgacatgcgcgcc
gagttcgcagccttcatggacaccgaggagggcctgcgctaccagcgcaacgaggaagcc
aaccgcacggcctggctggtggtgtccgtgttcctgctgttcacgctggtgttcaccggc
atggtggcctacttcggccgccggcaactcatgcggctttcgaacagctacgacgcggtg
ctgcgggaccaggccgcgcacgccgagcggctggcgcaacaggcatggctgcgcagcgcg
cagaccgagctggtgggcgaactggtgggcgaattgaacgcgaacgacctgggccgcaag
gtcctggccttcttctcgcgccacctggccagcgcggtcggcgcgctgtacgtgcgcgag
cggcacggcacgctgcgccgcgccgcgagctacggcttctcgatggaagccgaggcttcg
ccgcaggtgttctcgccgacccagagcctggtcggccaggcggccgccgaacggcgccgc
atgctggtcgagccgatccaggccgactacctgaaggtcaattcgggcctcggcgagatg
gcgcccgcggccgtgctgctggtgcccgtgtcgagcgacggcatcgtgaacggcgtgatc
gaactcggcctgccgggcgtgcccgatgcgcggaccaacgaattgctcgacctggtggcc
gaggacatcggcgattccctcgcggcggcgcgctaccgcgagcagctgcaggacgcattg
gccgagacgcagcagttgaacgaggaactgcaggtgcagcaggaagagctgcgcaccgcc
aatgaagagctcgaggagcagtcgcgcgcgttgcgggcttcgcaggccatgctggagaac
cagcaggccgagctggagcagaccaacagccagctttccgagcgcaccgaggcgctggac
cagcgcaatgcggccctgcgccgcgtgcagcgcgacctggaagatcgcgccgacgaactg
cagcgcgccagccgctacaagtcggagttcctggccaacatgtcacacgagctgcgcaca
ccgctcaacagcgcgctcatcctggccaagctgctcggcgacaacccgcagggcaacctg
agccccgagcaggtgaagttcgcggaatcgatctactcgtcgggcaacgatctgctggtg
ctgatcaacgacatcctcgacatctccaaggtcgaggcgggcaagctcgaagtggtggtc
gaggaggtggcgctcgacaagcttgcacagagcctggagagcaccttcgggccgctggcc
gccgagaagcagctggccttccggatggaaatacggcccggcgtgcctgccacgctggtc
accgaccgccaccgggtcgagcagattctgaagaacctgctctccaatgcgatcaagttc
accggcagcggcgaggtggcgcttgtggtctcggcggctgcgaatggcggtgcgctcttc
gcggtgagcgattcgggcatcggcatttcgcccgagcagaaggagctgatcttcgaagcc
ttccaccaggccgacggcaccaccagtcgccgctatggcggcaccggcctcgggctttcg
atttcgcgcgatctcacgcgcctgctgggcggcacgctcgcggtgcaaagccagcccgga
cagggcagcaccttcacgctgcagctgccggccgcggcgccccaggcctcgcaacaggca
gctcaggcacccgctccagcgcccgcaaagtccgccgcggtgcgcacgcccttccctgcc
gcgcatgccgctcccgcggcaccggtgccacccgttgccgtgccgccgccgtcctttgcc
gacgaccgcacgatgccgcccgaccaggtgcgccgggtgctcgtgatcgaggacgagccg
cagttcgcgcacatcctctacgacctggcgcacgagctcggctaccgctgcctggtcgcc
catggcgcggccgacggcttcgaactggcgcaccagttcctgccagatgccatcctgctc
gacatgcgccttcccgacagcaccgggcttggcctgctgcagcgcctgaaggattcgccg
cagacgcgccacatcccgatccacgtggtctccgccgccgacgacgcgcaggccgccgcc
ctgcacatgggcgccatcggctatgcgcagaagccggccacgcgcgccgagctgatgcag
gtgttcgcccggctcgaggaaaagctcgcgcagaaggtcaaggccgtgctgctggtggag
gacgatgcgctgcagcgcgaaagcgtgatccggctgatcggcgaccaagacatcgagatt
gccgccgtgggctccggcgaagaggcgctcgaactgctgcgcaggcgcgtcttcgactgc
atgatcaccgacctgcacctgcccgacatgcagggcagcgagctgctcaagcgcatggcg
tcggaggaaatcgtttcgttcccgcccgtgatcgtctataccgggcgcaacctcacgcgc
gacgaggaagccgaactgcagcgctattcgcgctccatcatcatcaagggcgcacgctcg
ccggaacgcctgctggacgaggtcacgctgttcctgcacaaggtcgaggccgagctgtcc
agcgaacgccagggcatgctgaaggcggcgcgcgggcgcgaccgcatcttcgagggccgc
accatcctgctggtggacgacgacgtgcgcaacctcttcgcgctcacgagcgcgctggag
cagcgcggcgcctcggtcgagatcggccgcaacggccgcgaggcgctcgaaaagctcgac
caggcgcgcgagatcgacctggtgctgatggacgtgatgatgccggagatggacggcctg
gaggccacgcgccggctgcgcgcggacccgcgcttcgagaagctgcccgtgatcgccatc
accgccaaggccatgaaggacgatcgcgagcagtgcctggccgcgggcgccagcgactac
ctggccaagcctgtggatttggagcgcctgttctcgcttctgcgcgtgtggatgcccaaa
atggagcggctgtga
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