Variovorax paradoxus B4: VAPA_1c27690
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Entry
VAPA_1c27690 CDS
T02835
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c27690
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c27690
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Plasmid_stab_B
Motif
Other DBs
NCBI-ProteinID:
AGU49866
UniProt:
T1XBK3
LinkDB
All DBs
Position
1:complement(2936850..2938997)
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AA seq
715 aa
AA seq
DB search
MKPSAKCPSIRRHRAMRAMACIAGLAMHPVASRAQAALPAVEVSAGETAPGSSLGLDLPS
ATGSRLGLAPRETPASVSSLGSADIAERNLARAQDVAVRFPGVTEAPAPGNGGTSLVARG
FAGHNSVAQLVDGTRLVVASGTVTYPFSTWPFESVEVLRGPASVLFGDGAIGAAVNYITK
KPRFDRTEREAFFSLGSFGTRQGGIGLRGPIKDTLAYSVYVDAGSSDGFRRFESYDRQNY
ALALAARPSSALKFTFSFDGGRNDDARYFGTPLLDGVLDSRLRRTNFNVDDSVVKYDDRM
WRAKAEYQLGNGIQLRNELYHLASVRHWRNAEAYTFNRAGTRVGRSDYIEILHDQEQTGN
RFDATFDGQLGGLKNRFVAGLDWYRTTLLHTNNSPYGGASTVDPFFFAPGHFTSPVPTLP
GRHSTLETTALFAEDALELAPGWKLVAGLRSDRMRLDNNDLRTGARLSKTYSPVTGRIGA
VWTPSDVVSFYGQYGTGTDPLSGALSLPNGGNSFDLTKGRQLEVGAKGSLPAIKGEWTLA
LYRIEKRNLLSRDASDPRITQQVGRQSSTGVELAMAAEPLPGWTVDANAALLRARYDDFN
EVVAGRAVSRAGNIPVGVPERTANLWTAYRFQPRWQLGIGARYVGARQSNAANTARLPAY
TVFDVSLAYEYSRSLDFSLAVKNLTDCDYAVSGTGNVRWLLGAPRTVQLTARARF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatccgcgaagtgtccatcgatccgccgccacagggcgatgcgcgccatggca
tgcatcgccggcctggcgatgcacccggtcgcatcgcgcgcccaggccgccttgccggcc
gtcgaggtgtcggccggcgaaaccgctcccggcagcagcctgggcctcgacctgccaagc
gcgaccgggtcgcgtctgggccttgcaccgcgcgaaacaccggccagtgtcagcagcctg
ggcagcgccgacatcgccgaacgtaatctggcccgtgcgcaggatgtcgctgttcgattt
cccggcgtcaccgaagcgcctgcgcccggcaatggcggcaccagcctggtggcgcggggc
tttgcgggacacaactccgtggcccaactggtcgacggcacacggctggtggttgcgtcc
ggcaccgtgacctatccgttctccacctggcccttcgagtcggtcgaggtgctcaggggg
ccggcctcggtgctctttggcgacggtgccatcggcgcggccgtcaactacatcaccaag
aagccgcggttcgaccgcacggagcgcgaagccttcttcagcctgggctcctttggcacc
cggcaaggcggcatcggcctgcgtggaccaatcaaggacaccttggcctattccgtctac
gtcgacgcgggcagcagcgatggctttcgccgcttcgaaagctacgaccggcagaactac
gcgctcgcccttgcggcgcgtccgagcagcgcgctcaagttcacgttctcgttcgatggc
ggccgcaatgacgacgcccgctacttcggcacgccgcttctcgatggcgtgctcgacagc
cggctgcgccgcaccaacttcaatgtggacgattcggtcgtgaagtacgacgaccgcatg
tggcgcgccaaggccgaataccagctcggcaacggcatccagttgcgcaacgagctctac
cacctggcgtcggtgcgccattggcgcaacgccgaggcctacaccttcaacagggccggc
acgcgggtcggccgcagcgactacatcgagatcctgcatgaccaggagcagacgggcaac
cggttcgatgccacgttcgacggccaactcggcggcctgaagaaccgcttcgtcgccggc
ctggactggtatcgcacgaccctgctgcacaccaacaattcgccctacggcggcgcgagc
acggtcgatccgttcttctttgcgccgggccatttcaccagcccggtgccaacgcttccg
ggacgccattcgaccctggagacgacggcactcttcgcggaggatgcgctggaactcgcg
cccggctggaagctcgtggccggcctgcgcagcgaccgcatgcggctcgataacaacgac
ctgcgcaccggcgcccgtctgtccaagacatacagtcccgtcacgggccgcatcggcgcg
gtctggacacccagcgacgtggtttctttttatggccagtacggaacgggaaccgaccca
ttgagcggtgcgctgtcgcttccgaatggtggaaattccttcgacctgaccaagggccgg
cagctcgaggtgggggccaagggcagcctgccggccatcaagggcgaatggacgctggcc
ctctaccgcatcgagaagcgcaacctgctgtcccgcgatgccagcgaccccaggatcacc
cagcaggtcgggcgccaatcgtcgaccggcgtcgaactggccatggcggccgagccgctg
cccggctggaccgtcgacgccaacgcggctctgctgcgtgcgcgctacgacgacttcaat
gaggtggtcgccgggcgtgctgtctcccgcgcgggcaacatcccggtcggcgtgcccgaa
cgcacggccaacctgtggacggcctatcgcttccagccccggtggcagctgggcatcggg
gcgcgctacgttggcgcgcggcagtccaatgcggccaacacggcgcgcctgccggcctac
acggtgttcgatgtgtcgctggcctacgagtattcgcgcagcctcgatttcagcctggcc
gtcaagaacctgacggactgcgactacgcggtctcgggcaccggcaacgtgcgctggctg
ctcggcgcgccgcgcacggtgcagctgacggcgcgtgcgcgcttctga
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