Variovorax paradoxus B4: VAPA_1c28110
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Entry
VAPA_1c28110 CDS
T02835
Symbol
nusA
Name
(GenBank) transcription elongation protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpd03021
]
VAPA_1c28110 (nusA)
03009 Ribosome biogenesis [BR:
vpd03009
]
VAPA_1c28110 (nusA)
Transcription machinery [BR:
vpd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VAPA_1c28110 (nusA)
Ribosome biogenesis [BR:
vpd03009
]
Prokaryotic type
rRNA transcription factors
VAPA_1c28110 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AGU49908
UniProt:
T1XBH6
LinkDB
All DBs
Position
1:complement(2972881..2974365)
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AA seq
494 aa
AA seq
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MNREMLMLVDAISREKNVERDVVFGAVESALAQATKKLHQGDVDIRVSVDRDSGDYETFR
RWHVVPDEAGLQLPDQEILLFEAKEEMPDIEVGEYIEEAVDSVPIGRIGAMAAKQVILQK
IRDAEREMLLNDFMSRGDKIFVGTVKRLDKGDIIVEAGRVEGRLRRSEMIAKENLRNGDR
VRAMIMEVDLTLRGAPIILSRSAPEFMIELFRQEVPEIEQGLLEIKSCARDPGSRAKIAV
LSHDKRVDPIGTCVGVRGTRVNAVTNELAGERVDIVLWSEDPAQFVIGALAPANVSSIVV
DEEKHAMDVVVDEENLAIAIGRGGQNVRLASDLTGWKINIMDANESAQKQASETDASRKL
FMEKLDVDEEIADILISEGFNSLEEVAYVPISEMLEIEAFDEDTINELRSRAKDALLTME
IAKEEGVETVSQNLRDLEGLDPELIPKLAEAGVHTRDDLADLAVDELTEITGHSADDAKA
LILKAREHWFAGQA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcgaaatgttgatgttggtggatgcgatctcgcgcgagaagaacgtcgagcgc
gacgtggttttcggtgcggtcgaatccgcgctggcgcaagccaccaagaagctccaccag
ggcgacgtggacatccgcgtctcggtcgaccgcgacagcggcgactacgaaaccttccgc
cgctggcacgtcgtccctgacgaggccggcctgcagctgcccgaccaggagatcctcctg
ttcgaggccaaggaagaaatgcccgacatcgaagtcggcgagtacatcgaagaagcggtg
gactcggttccgatcggccgcatcggcgcgatggctgccaagcaggtcatcctgcagaag
atccgcgacgccgagcgcgagatgctgctcaacgacttcatgtcgcgcggcgacaagatc
ttcgtgggcaccgtcaagcgcctggacaagggtgacatcatcgtggaggccggccgcgtc
gaagggcgtctgcgccgcagcgagatgatcgccaaggaaaacctgcgcaacggcgaccgc
gtgcgggccatgatcatggaagtcgacctgacgcttcgcggcgcgccgatcatcctgtcg
cgctcggcgcccgagttcatgatcgagctgttccgccaggaagtgcccgagatcgaacaa
ggtctgctcgagatcaagagctgcgcccgcgatcccggctcgcgcgccaagatcgccgtg
ctctcgcacgacaagcgtgtcgacccgatcggcacctgcgtcggcgtgcgcggcacgcgt
gtcaacgccgtgaccaacgagctcgccggcgagcgcgtggacatcgtgctgtggagcgag
gacccggcccagttcgtgatcggcgccctggctccggccaacgtgtcgtcgatcgtggtc
gatgaagaaaagcacgccatggacgtggtggtcgacgaggaaaacctcgccatcgccatc
ggccgcggcggtcagaacgtgcgcctggcttccgacctgacgggctggaagatcaacatc
atggacgccaatgaatcggcccagaagcaggcgagcgaaaccgacgccagccgcaagctg
ttcatggaaaagctcgacgtcgacgaggaaatcgccgacatcctgatctccgaaggcttc
aacagcctcgaggaagtggcctatgtgccgatctccgaaatgctggagatcgaagccttc
gacgaagacacgatcaacgagcttcgttcgcgcgccaaggatgcgctgctgaccatggaa
atcgccaaggaagagggcgtcgagaccgtctcgcagaatctgcgcgacctcgaaggcctc
gaccccgagctgattcccaagctggccgaggcgggtgtacacacccgcgacgacctcgcc
gacctcgcggtcgatgaactcaccgagatcaccggccacagcgccgatgacgccaaagcc
ctcatcttgaaagcccgcgaacactggttcgccggccaagcgtga
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