Variovorax paradoxus B4: VAPA_1c28140
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Entry
VAPA_1c28140 CDS
T02835
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c28140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c28140
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
VAPA_1c28140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_16
CbiA
Pox_A32
nSTAND1
AAA_7
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
AGU49911
UniProt:
T1XBP6
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All DBs
Position
1:complement(2976418..2978049)
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AA seq
543 aa
AA seq
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MSEMKHQPLLDVKELRVAFGGKEVVHGIDFRIGAGEKLALVGESGSGKTVTALSLLRLAQ
NADVAGMAKLFDSANTPNGRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYTVGDQIA
EVLELHEGLSARAAQAAAVQLLADTGIPEPERRARAFPHQLSGGQRQRAMIAMALACKPR
LLLADEPTTALDVTVRAQILELLADLQRRHGMAVLLITHDLNLVRRFADRVAVMEDGHIV
EQGAVAAVFEAPQHAYTRRLIDSHPERDVTAVPTGADARPVLEATGLRVGYPVPRPGFAG
WFRKGEFVAVQNADFRIAPGETLGVVGESGSGKSTLALAALGLLKHQGALKVDGKGWAVD
RSSDLALRRVMQVVFQDPFSSLSPRMTVEQIVGEGLRVHATELDTAQRRARALAALADVG
LNEAQFPSLLDRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQKQVLGLLQ
RLQRERGLSYLLITHDVEVIRAMAHQVIVMKDGAILEAGPVERVLDAPEHPYTKKLVAAA
LLE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagatgaagcaccagccgctgctggacgtgaaagagctgcgcgtggccttcggc
ggcaaggaggtggtgcatggcatcgacttccgcatcggcgcgggcgaaaagctcgcgctc
gtcggcgaatcgggttcgggcaagaccgtgacggcactgtcgctgctgcgcctggcacag
aacgccgacgtggccggcatggcgaagctgttcgattccgcaaatacaccgaacgggcgc
gatctgctctcgatcccggagcgggagctgcgcggcatccgcggcaaggagatcgcgatg
atcttccaggagccgatgaccgccctcaacgcgctctataccgtgggcgaccagatcgcc
gaggtgctcgaattgcacgagggcctgtcggcgcgcgcggcacaggcggccgccgtgcag
ctgctggccgacaccggcattcccgagccggagcggcgggcgcgggcgtttccgcaccag
ctctcgggcggccagcgccagcgcgccatgatcgccatggcgctcgcctgcaagccgcgc
ttgctgctggccgacgagccgaccaccgcgctcgacgtcacggtgcgcgcgcaaatcctg
gagctgctcgccgatctgcagcgcaggcatggcatggccgtgctgctgatcacgcacgac
ctcaacctcgtgcgccggttcgccgaccgggtcgccgtgatggaggacggccacatcgtg
gagcaaggcgccgtggctgccgtgttcgaggcgccgcagcacgcctacacccgcaggctg
atcgacagccatcccgagcgcgatgtcaccgccgtgcccacgggtgccgacgcgcggccg
gtgctcgaggccacgggcctgcgcgtgggctacccggtgccccggcccggtttcgccggc
tggttccgcaagggcgaattcgtcgcggtgcagaacgcggatttccgcattgcgccgggt
gaaacgctgggcgtggttggcgagtccggatcgggcaagtccacgctggcgctggctgcc
ctcgggctgctgaagcaccagggtgcgctgaaagtggacggcaagggctgggcggtggac
cggagctccgacctggccttgcggcgggtcatgcaagtggttttccaggacccgttctcc
tcgctctcgccacgcatgacggtcgagcagatcgtgggcgagggactgcgcgtgcacgcg
accgaactcgacacggcacagcgccgcgcaagggcactggcggcgctggccgacgtgggc
ttgaacgaggcgcagtttccctcgctgctcgaccgctatccgcacgagttctcgggtgga
cagcgccagcggctcgcgattgcgcgcgcactcatcgtcgatccgcagctgctggtgctc
gacgagcccaccagcgccctcgacgtgacgatccagaagcaggtgctgggtttgctccag
cgcctgcaacgcgagcggggcctgagctacctgctgatcacgcacgacgtggaagtgatc
cgcgccatggcgcaccaggtcatcgtgatgaaggatggtgccattctcgaagccggcccc
gtcgagcgcgtgctcgacgcgcccgagcacccttacacaaagaaactggtggccgccgcg
ctactggaatag
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