Variovorax paradoxus B4: VAPA_1c28260
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Entry
VAPA_1c28260 CDS
T02835
Name
(GenBank) ABC transporter, substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c28260
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c28260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c28260
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c28260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AGU49922
UniProt:
T1XAG5
LinkDB
All DBs
Position
1:complement(2988771..2989976)
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AA seq
401 aa
AA seq
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MQLKWTAVALAALTLVACGKKEEAAAPAAPAPTAAAPAPAAPPADALIVKIGHVGPTSGA
IAHLGKDNEFGAKMAIEDLNAKGLKIGDKVAKFELLAEDDAGDPKQGTAVAQKLVDSKVN
GIVGHLNSGTTIPASKLYSDAGIPQISPSATNPKYTRQGFKTTFRVVADDTQLGGTLGKY
AVETLKGKNIAVIDDRTAYGQGVAEEFEKAAKAAGGTIVGHEFTTDKSTDFNAILTKLKS
TKPDVLFFGGMDAVGGPMLKQVKQLGLNVKFMGGDGLCTSELPKLAGDAIGEEMVVCAEA
GGVDGDFKQPLEDFKAKFKAKNGVEVQIYAPYVYDAVNVLAEAMVKAGSSDPEKYLPEVG
KVQYKGVTGPIAFDEKGDIKNGALTLYTYKGGVRTQIAVVR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgaaatggactgcggtcgcactggctgctctcacgcttgtggcttgcggcaag
aaagaagaagctgctgctcccgccgctccggcgcccacggcagcggcccccgcacctgca
gcgcctccggcagatgcattgatcgtcaagatcggccacgtcggtcccaccagcggtgcc
attgcccacctcggcaaggacaacgagttcggcgccaagatggccatcgaagacctcaat
gccaagggcctcaagatcggcgacaaggttgccaagttcgaactgctggcagaggacgac
gccggcgatccgaagcaaggcacggccgtggcccagaagctggtcgacagcaaggtcaac
ggcatcgtcggccacctgaattccggcaccaccattcccgcctccaagctctacagcgac
gctggcattccgcagatttcgccgtcggcaaccaaccccaagtacacgcgccaaggcttc
aagaccacgttccgcgtggtggccgacgacacgcagctcggcggcacgctgggcaagtac
gctgtcgaaacgctcaagggcaagaacattgccgtgatcgacgaccgcacggcttacggc
caaggcgttgccgaagaattcgagaaggccgccaaggctgccggcggcaccatcgtcggc
cacgagttcaccaccgacaagtcgaccgacttcaacgccatcctgaccaagctcaagtcc
accaagcccgacgtgctgttcttcggcggcatggacgccgttggcggcccgatgctcaag
caggtcaagcaactcggcctgaacgtcaagttcatgggcggcgacggcctgtgcaccagc
gagctgccgaagctggctggcgatgccatcggcgaagagatggtggtttgcgccgaagcc
ggcggcgtcgacggcgacttcaagcagccgctggaagacttcaaggccaagttcaaggcc
aagaacggcgtggaagtgcagatctacgctccgtacgtctacgacgcggtcaacgtgctg
gccgaagccatggtcaaggccggttcttccgaccctgaaaagtacctgcccgaagtcggc
aaggtgcagtacaagggcgtgaccggcccgatcgccttcgacgaaaagggcgacatcaag
aacggcgcgctgacgctctacacctacaagggtggcgtgcgtacgcagattgccgtggtg
cgctga
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