Variovorax paradoxus B4: VAPA_1c28440
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Entry
VAPA_1c28440 CDS
T02835
Name
(GenBank) putative twitching mobility protein
KO
K02670
twitching motility protein PilU
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpd02044
]
VAPA_1c28440
02035 Bacterial motility proteins [BR:
vpd02035
]
VAPA_1c28440
Secretion system [BR:
vpd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
VAPA_1c28440
Bacterial motility proteins [BR:
vpd02035
]
Pilus system
Twitching motility proteins
VAPA_1c28440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
SRP54
AAA_22
ABC_tran
AAA_30
AAA_33
Zeta_toxin
AAA_28
ResIII
AAA
TrwB_AAD_bind
AAA_16
AAA_7
nSTAND3
Arf
AAA_23
AAA_29
CarboxypepD_reg
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AGU49940
UniProt:
T1XCP8
LinkDB
All DBs
Position
1:3010194..3011342
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AA seq
382 aa
AA seq
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MNMMERILRLMAERKASDIYLSAHSPVLIRINGTCVPINAQVLPAAAPLALLAEVVPEAR
IQELENKGELNMAVMLEGAGNYRISAMRQRGSYAVVVRHIASTIPSFADLNLPDILKTLI
MEKRGLILMVGATGAGKTTTLASMLDYRNEHATGHILTVEEPIEFTYTNKKSLVNQRDVG
SDTESLQVALKNALRQAPDVIQIGEIRDRDTMTAAIAYAQSGHLCVATLHANNSYRALNR
ILSFFPVEVRPTLLGDLGSALRAIVSQRLLRTPSGGRVPALEVMLNTALVAELIEKGDFS
AVKEAMEQSMAEGSQTFEEDIARLITEERVTREEGLAQADSPTNLMWRLQNRAAPKQKTE
DRSLMDQVDEPTFTDITLDVKF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgatggagcgaatccttcgtctgatggccgagcgcaaggcctccgacatctac
ctctcggcgcactccccggtgctgatccgcatcaacggcacctgcgtgccgatcaatgcc
caggtgctgccggccgccgcgccgctcgcgctgctggccgaagtggtgcccgaagcccgc
atccaggaactggagaacaagggcgaactcaacatggccgtgatgctcgagggcgccggc
aactaccgcatcagcgccatgcgccagcgcggcagctatgcggtggtggtgcggcacatc
gcctcgaccattcccagcttcgccgacctgaacctgcccgacatcctcaagacgctgatc
atggagaagcgcggcctgatcctgatggtgggcgcaaccggcgcgggcaagaccaccacc
ctggcctcgatgctcgactaccgcaacgagcacgccacgggccacatcctcacggtggaa
gaacccatcgagttcacctacaccaacaagaagtcgctggtgaaccagcgcgacgtaggc
agcgacaccgaatcgctgcaggtcgcgctcaagaacgcgctgcgccaggcgcccgacgtg
atccagatcggcgaaatccgcgaccgcgacaccatgaccgcggccatcgcctatgcgcag
tcgggccacctgtgcgtggccacgctgcatgccaacaacagctaccgcgcgctcaaccgc
atcctgagcttcttcccggtcgaggtgcgccccacgctgctgggcgacctgggctcggcc
ctgcgcgccatcgtgtcgcagcggctgctgcgcacgccgtcgggcggccgcgtgccggcg
ctcgaggtcatgctcaacacggccctggtggccgagttgatcgaaaagggcgatttctcc
gccgtcaaggaagccatggagcagtcgatggccgaaggctcccagaccttcgaggaagac
attgcccgcctcatcaccgaagagcgcgtgacgcgcgaggaaggcctggcccaggccgac
tcgcccaccaacctgatgtggcgcctgcagaaccgcgccgcccccaagcagaagaccgaa
gaccgcagtctgatggaccaggtcgacgaacctacctttaccgacatcacgctcgacgtg
aagttctga
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