Variovorax paradoxus B4: VAPA_1c28920
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Entry
VAPA_1c28920 CDS
T02835
Symbol
codA
Name
(GenBank) cytosine deaminase CodA
KO
K01485
cytosine/creatinine deaminase [EC:
3.5.4.1
3.5.4.21
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00240
Pyrimidine metabolism
vpd00330
Arginine and proline metabolism
vpd01100
Metabolic pathways
vpd01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VAPA_1c28920 (codA)
09105 Amino acid metabolism
00330 Arginine and proline metabolism
VAPA_1c28920 (codA)
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.1 cytosine deaminase
VAPA_1c28920 (codA)
3.5.4.21 creatinine deaminase
VAPA_1c28920 (codA)
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Gene cluster
GFIT
Motif
Pfam:
Amidohydro_3
Amidohydro_1
ESR1_C
Motif
Other DBs
NCBI-ProteinID:
AGU49987
UniProt:
T1XAM7
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All DBs
Position
1:3056609..3057889
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AA seq
426 aa
AA seq
DB search
MLDLLITNATLPDGRTGMSIAVQGGRIAEVTAGLDAPALEKLDAQGLLLAPHFVDPHFHM
DATLSYGLPRINQSGTLLEGIALWGELKPLLTADALIERALAYCDWAVAKGLLAVRSHVD
TSDPSLLAVDALLEVKRKVSPYLDLQLVAFPQDGVLRSEGGVDNLKRALDKGVDVVGGIP
HFERTMADGAASVKLLMELAAGRGKLVDMHCDESDDPLSRHIETLSAETWRLGMQGRVTG
SHCTSMHSMDNYYVSKLLPLIAQSGVSVVSNPLINITLQGRHDTYPKRRGMTRVPELMAA
GVNVAFGHDCVMDPWYGMGSGDMLEVAHMGLHVAQMTSQAGIRQCFEAVTTNAARVMHLE
GYGLQAGCDASFVLLQARNPVEAIRLRATRLKVFRKGRLLAETPAATAALHLPGRGGHTG
WMIPKA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacctcctcatcaccaacgccaccctccccgacggccgcaccggcatgtcgatc
gccgtgcagggcggccgcatcgccgaagtcaccgccgggctcgacgcaccggccctcgaa
aagctcgatgcccaaggcctgctgctcgcaccgcatttcgtcgacccgcacttccacatg
gatgccacgctgagctacggactgccgcgcatcaaccagagcggtacgctgctcgaaggc
attgcgctgtggggcgaactcaagccgctgctcacggccgacgcactgatcgagcgtgcg
ctcgcgtattgcgactgggcggtggccaagggcctgctggccgtgcgttcgcatgtggac
acgagcgacccgagcctgctcgcggtcgatgcgctgctcgaggtcaagcgcaaggtctcc
ccatacctcgacctgcagctcgtggcctttccgcaggatggcgtgctgcgctccgagggc
ggcgtcgacaacctgaagcgcgcgctcgacaagggcgtggacgtggtcggcggcattccg
catttcgagcgcaccatggccgatggcgccgccagcgtgaagctgttgatggagcttgcg
gccgggcgcggcaagctggtcgacatgcattgcgacgagtcggatgacccgctctcgcgc
cacatcgaaaccctgtcagccgagacctggcgcctcggcatgcagggccgcgtgacgggc
tcgcactgcacctcgatgcattcgatggacaactactacgtgagcaagctgctgccgctg
atcgcgcagagcggcgtcagcgtcgtttccaacccgctcatcaacatcacgctgcagggc
cgccacgacacctaccccaagcgccgcggcatgacgcgcgtgcccgagctgatggccgcc
ggcgtgaacgtcgccttcggtcacgactgcgtgatggacccgtggtatggcatgggctcg
ggcgacatgctcgaagtggcgcacatgggcctgcacgtggcgcagatgacgagccaggcc
ggcatccgccagtgcttcgaggcggtcaccacgaatgccgcgcgcgtgatgcacctggag
ggctacggcctccaggcaggctgcgatgcgagcttcgtgctgctgcaggcccgcaacccg
gtcgaggcgatccggctgcgcgcaacgcggctcaaggtgttccgcaagggcagactgctc
gcggaaacgccggcggccacggccgcgctgcatctgccgggccgcggtggccacaccggc
tggatgatcccgaaagcctga
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