Variovorax paradoxus B4: VAPA_1c29740
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Entry
VAPA_1c29740 CDS
T02835
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00900
Terpenoid backbone biosynthesis
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
VAPA_1c29740 (ispF)
Enzymes [BR:
vpd01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
VAPA_1c29740 (ispF)
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Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
AGU50067
UniProt:
T1XAW5
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All DBs
Position
1:complement(3137206..3137700)
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AA seq
164 aa
AA seq
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MTAPFNIRVGEGWDVHQLVAGRKLILGGVEVPHTTGLLGHSDADVLLHAITDALLGAAGL
GDIGRHFPDTDAQFRGADSAVLLGEAARRVRAAGWEIGNVDSTVIAQAPKLAPHIPAMCR
RIAETLGLAPDQVNVKAKTAEKLGPVGEGRAMEARAVVVLHRQG
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccattcaatatccgcgtgggcgagggctgggacgttcaccagctggtggcg
gggcgcaagctgatcctcggcggcgtggaggtgccgcacaccaccggcctgctggggcat
tcggacgccgacgtgctgctgcacgccatcaccgatgccttgctcggcgcggcgggcctg
ggcgacatcggccggcacttccccgacaccgacgcgcagtttcgcggcgcggattcagcg
gtgctgctcggcgaagcggcgcgccgcgtgcgcgccgcaggctgggagatcggcaacgtc
gacagcacggtgatcgcgcaggcgcccaagctggcaccgcacattccggccatgtgccgg
cgcatcgccgagaccctgggccttgcgcccgaccaggtcaacgtgaaggccaagacggcc
gaaaagctcggcccggtcggcgaaggccgcgcaatggaagcccgcgcggtggtggtgctg
caccgccagggctga
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