Variovorax paradoxus B4: VAPA_1c30020
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Entry
VAPA_1c30020 CDS
T02835
Name
(GenBank) putative ABC transporter, substrate-binding protein
KO
K25034
cobalamin transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c30020
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Cobalamin transporter
VAPA_1c30020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_2
YhiY
Motif
Other DBs
NCBI-ProteinID:
AGU50095
UniProt:
T1XDA6
LinkDB
All DBs
Position
1:complement(3166786..3167655)
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AA seq
289 aa
AA seq
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MTKHWIRSFFTALALGLCALAAHAVDVVDERGVTVSLPQPPQRIVTLLPSLTEGVCALGA
CSRLVGVDNYSNSPSAVRALPQLGGGLDPNVEAIVALRPDAVLLAKSSRVTQRLEALGLK
VLVLEPKSHADVRRVLDKLDQVLGTHEAPNIWRVIDASVSAAAQSLPASAKGQRVYFEVN
SAPYAAGESSFIGETLTRLGMKNIVPASLGPFPKLNPEYVVRANPDLIMVSVRSAPGMEQ
RPGWSGIRAVREGRICRFDAAQSDVLVRPGPRMDEAARLMARCIAEKAG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcactggattcgatcttttttcacggcccttgccctcggcctctgtgcgctg
gccgcgcacgccgtcgacgtggtcgacgagcgcggcgtgacggtgagtctgccgcagccg
ccgcagcgcatcgtcactctgctgccgtcgctgaccgaaggggtctgcgcgctcggtgcg
tgttcccgcctcgtgggcgtcgacaactattccaactcgccgagcgcggtgcgcgccttg
ccgcagctgggcgggggcctcgatcccaatgtcgaagccatcgtggcgctgcggcccgat
gcggtgctgctcgccaagtcgtcgcgcgtgacgcagcggctcgaggcgctgggcctcaag
gtgctggtgctcgaacccaagagccatgccgacgtgcggcgcgtgctcgacaagctcgac
caggtgctcggcacccacgaggctccgaacatctggcgcgtgatcgatgccagcgtatcg
gccgcggcacagtcgctgccggccagtgcgaaggggcagcgcgtctatttcgaggtcaac
agcgcgccctatgcggccggcgagtcgtcgttcatcggcgaaacgctcacgcggctgggc
atgaagaacatcgtgccggcttcgctcgggccttttcccaagctcaaccccgaatacgtg
gtgcgcgccaatcccgatctcatcatggtcagcgtgcgcagcgcgccgggcatggagcag
cggccgggctggagcggcatccgcgcggtgcgcgagggccggatctgccgcttcgacgcc
gcgcagtcggacgtgctcgtgcgccccggcccgcgcatggacgaggccgcacggctgatg
gcgcgctgcatcgcggagaaggccggctga
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