Variovorax paradoxus B4: VAPA_1c30380
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Entry
VAPA_1c30380 CDS
T02835
Name
(GenBank) putative transporter, MFS-type
KO
K06902
MFS transporter, UMF1 family
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpd04131
]
VAPA_1c30380
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c30380
Membrane trafficking [BR:
vpd04131
]
Autophagy
Other autophagy associated proteins
Others
VAPA_1c30380
Transporters [BR:
vpd02000
]
Major facilitator superfamily (MFS)
Unknown transporters
Unknown major facilitator-1 (UMF1) [TC:
2.A.1.24
]
VAPA_1c30380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG22
MFS_1
MFS_2
Motif
Other DBs
NCBI-ProteinID:
AGU50131
UniProt:
T1XCD1
LinkDB
All DBs
Position
1:complement(3204459..3205760)
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AA seq
433 aa
AA seq
DB search
MALFPPSALNAGVRKREVFGWAMYDFANSGYTTVVITAVFAAYFVGGIAKGAPWAAFAWT
AALSASYAVVMLSMPAIGAWADRRAAKKRVLVVATVGCVVATAALAFTPRFAGPMGVAVA
MALIIVSNTFYSYGESLTGAFLPELATAEGMGKVSGWGWSFGYVGGMLALGLCLAYVLSA
QAKGLPASHFVPVTMLITAAIYGAAASATFALLPERAQPRTASSAVGAWQQLRATFRQAR
AHRDFMQLLVCTVCYQGGVAVAITLAAIYAEQVIGFVASETMVLIFVLNIAAALGAFGFG
YVQDRIGHKISLAGTLVAWIAVCVIAAMATTKGTFWWAAAIAGLAMGSSQSAGRAMTGYL
APPRQLAEFFGLWTFATRLASIVGPLMFGAITWAASGNQRIAILSTAALFIAGLLLLLPI
DMARGREAAQRSR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccgccttctgccctgaatgccggcgtgcgcaagcgcgaggtgttcggc
tgggccatgtacgactttgccaattccggctacaccacggtcgtcatcacggccgtgttt
gccgcctatttcgtgggtggcatcgccaagggcgcgccatgggcggccttcgcctggacc
gcggcgctcagcgcgtcctatgccgtcgtcatgctctcgatgcctgccatcggcgcctgg
gccgaccggcgcgcggccaagaagcgggtgctcgtggttgcgacggtgggctgcgtcgtt
gcgacagctgcgctcgcattcacgccgaggttcgcagggcccatgggcgtcgcggttgcg
atggcgctgatcatcgtctcgaacactttctattcctatggcgagtcgctgaccggcgcc
ttcctgcccgaactcgcgacagccgagggcatgggcaaggtcagcgggtggggctggagt
ttcggctacgtcggcggcatgctcgcgctggggctgtgcctggcctatgtgctgtcggcc
caggcgaaaggcttgcctgcgtcgcacttcgttccggtcacgatgctgatcacggcggcc
atctacggcgcggcggcttctgccacctttgctctcttgcccgaacgcgcgcagcctcga
acggccagcagcgcagtgggagcgtggcagcaactgcgcgccaccttccggcaagcccgc
gcccaccgcgatttcatgcagttgctggtttgcacggtctgctaccagggcggcgtggcg
gtggccatcacgctcgcggccatctatgccgaacaggtcatcggcttcgtggcgagtgaa
accatggtgctgatcttcgtgctcaacattgcggccgcgctcggcgccttcggcttcggc
tacgtgcaggaccgcatcggccacaagatctcgctggccggtacgctggtggcgtggatc
gcggtctgcgtgattgccgcgatggcgaccaccaagggcaccttctggtgggccgctgcc
attgcagggctcgccatgggctcgagccagtcggcgggccgtgccatgacgggctacctg
gccccgccgcggcagctcgcggagttcttcgggctctggacctttgccacgcggctcgcg
agcatcgtcggtccgctgatgttcggcgccatcacgtgggccgcaagcggcaaccagcgc
atcgccattctctcgaccgcggcgctgttcattgcgggactgctgctgttgctgcccatt
gacatggcgcgcggccgggaagccgcgcagcgcagccggtga
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