Variovorax paradoxus B4: VAPA_1c30630
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Entry
VAPA_1c30630 CDS
T02835
Name
(GenBank) putative ABC transporter, ATP-binding protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c30630
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c30630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c30630
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c30630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_23
AAA_21
AAA_30
SMC_N
RsgA_GTPase
AAA_29
AAA_22
AAA_27
AAA_33
MMR_HSR1
AAA
Motif
Other DBs
NCBI-ProteinID:
AGU50152
UniProt:
T1XB62
LinkDB
All DBs
Position
1:complement(3229251..3230015)
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AA seq
254 aa
AA seq
DB search
MLETLDLTIRFGGHVAVNGVSCAFAPGTLTAIVGPNGAGKTTYFNLISGQLKASAGTVSL
DGQLLSGLSPSARTHAGLGRAFQLTNLFPNLTVLENVRLAVQATREGAHRRGLNLWSIWS
DHKGLTERADQILSDVALKSREHATVASLPHGDQRKLEVALLMALEPKVFMFDEPTAGMN
AAEAPVILDLIRKLKQDKTKTILLVEHKMDVVRELADRIIVLHNGTLVADGEPAEVIASP
VVQEAYLGIAKEAA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagacgctagacctgaccatccgcttcggcgggcacgtggccgtcaacggcgtg
agctgcgcgttcgcgccgggcacgctgacggccatcgtcggccccaacggggcgggcaag
accacctacttcaacctgatctcgggccagctcaaggcgagcgcgggcacggtgtcgctc
gatgggcagctgctgtcggggctgtcgccgtcggcgcgtacgcacgcggggctggggcgg
gccttccagctcaccaacctgttcccgaacctcacggtgctggagaacgtgcgactggca
gtgcaggccacgcgcgagggcgcgcaccggcgcgggctcaacctgtggagcatctggagc
gaccacaaggggctgaccgagcgcgccgaccagatcctgtccgacgtggcgctgaagtcg
cgcgagcatgcgacggtggccagcctgccgcacggcgaccagcgcaagctcgaggtggcg
ctgctgatggcgctcgagcccaaggtcttcatgttcgatgaaccgacggccggcatgaat
gcggccgaggcgcccgtcatcctcgacctgatccgcaagctcaagcaggacaagaccaag
accatcctgctggtcgaacacaagatggacgtggtgcgcgagcttgcggaccggatcatc
gtgctgcacaacggcacgctggtggccgatggagaaccggcggaggtgattgcttctccg
gtggtgcaggaggcctatctgggcattgcgaaggaggctgcatga
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