Variovorax paradoxus B4: VAPA_1c30840
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Entry
VAPA_1c30840 CDS
T02835
Name
(GenBank) NADH-quinone dehydrogenase
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00630
Glyoxylate and dicarboxylate metabolism
vpd00680
Methane metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VAPA_1c30840
09102 Energy metabolism
00680 Methane metabolism
VAPA_1c30840
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GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
SLBB_2
Motif
Other DBs
NCBI-ProteinID:
AGU50173
UniProt:
T1XCA3
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All DBs
Position
1:3253855..3255411
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AA seq
518 aa
AA seq
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MTTTIYVPRDSAALAVGADRVARQIEAEARARNADVRIVRNGSRGLFWLETLVEVTTPQG
RVAYGPVTRADVAGLFDAGFLSGGAHALNLGLTEEIPYLKKQERLTFARMGVTDPVSVAD
YEAHEGFAGLRRALALAPAEIVQQVLDSGLRGRGGAAFPAGIKWKTVLAAQAPQKYIVCN
ADEGDSGTFSDRMTMEGDPLMLVEGMAIAGIATGATEGYIYVRSEYPHAIATLDEAIRHA
EQAGFLGDDILGSGRGFRLIVRKAAGAYVCGEETALLESLEGRRGIVRAKPPLPALQGLF
GQPTVINNVITLASVPLILARGTDFYRNYGMGRSRGTLPFQLAGNIRHGGLVEKAFGLSL
RELLYDFGGGSASGRPIKAVQVGGPLGAYVPESQWDLPLDYEAYAAVGAVVGHGGIVVHD
DTADMSQLARYAMEFCALESCGKCTPCRIGSTRGVEVIDKITSNQNRPQQVILLRDLCDT
MLHGSLCAMGGMTPYPVLSAINHYPEDFGVEAPDRAAA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccatctatgtcccgcgcgactccgcggcgctggctgtcggcgccgaccgg
gtggccaggcagatcgaagcggaagcccgtgcgcgcaacgccgatgtgcgcatcgtgcgc
aacggctcgcgcggcctgttctggctggagacgctggtcgaagtgaccacgccgcaaggc
cgcgtggcctacggccccgtcacgcgcgccgacgtcgccggcctgttcgacgccggcttt
ctttccggcggcgcccatgcgctgaacctgggcctgaccgaagagattccatacctgaag
aagcaggagcgcctgaccttcgcccgcatgggcgtgaccgatccggtgtccgtggccgac
tacgaggcgcacgagggcttcgccggactgcgccgcgcgctggcgctcgcaccggccgag
atcgtgcagcaggtgctggattccggactgcgcggccgcggcggcgccgcattcccggcc
gggatcaagtggaagacggtgctggccgcgcaggcgccgcaaaaatacatcgtctgcaat
gcggacgaaggcgattcgggcaccttctcggaccgcatgacgatggaaggcgatccgctg
atgctggtggaaggcatggccatcgcgggcattgcaacgggcgcgaccgaaggctacatc
tacgttcgctcggaatacccgcatgccattgccacgctcgatgaggccatccgccatgcc
gagcaggcgggcttcctgggcgacgacatcctgggctcgggccgcggcttccgcctgatc
gtgcgcaaggccgccggagcctacgtgtgcggcgaggaaaccgcgctgctcgaaagcctg
gaaggccgccgcggcatcgtgcgcgccaagccgccgctgccggcgctgcaggggctgttc
ggccagcccaccgtgatcaacaacgtgatcacgctggcgtcggtccccctcatcctggcg
cgcggcacggacttctacaggaactacggcatgggccgctcgcgcggcacgctgccgttc
cagctggccggcaacatcaggcatggcggcctggtcgagaaggccttcggcctgagcctg
cgcgaactgctctacgacttcggcggcggcagcgcgagcggccggccgatcaaggcggtg
caggtgggcggcccgctgggcgcctacgtgcccgaatcgcagtgggacctgccgctcgac
tacgaggcctatgcggccgtgggcgcggtggtcgggcacggcggcatcgtggtgcacgac
gacacggccgacatgtcgcagctggcccgctacgcgatggagttctgcgcactcgagtcc
tgcggcaagtgcacgccctgccgcatcggctccacgcgcggcgttgaagtgatcgacaag
atcacgagcaaccagaaccgcccgcagcaggtcattctgctgcgcgacctgtgcgacacc
atgctgcacggctcgctctgcgccatgggcggcatgacgccctaccccgtgctgtcggcc
atcaatcactaccccgaggacttcggcgtcgaagcccccgaccgcgccgcagcctaa
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