Variovorax paradoxus B4: VAPA_1c30990
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Entry
VAPA_1c30990 CDS
T02835
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c30990
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VAPA_1c30990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
NMT1_3
Motif
Other DBs
NCBI-ProteinID:
AGU50188
UniProt:
T1XCB6
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All DBs
Position
1:3270973..3271950
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AA seq
325 aa
AA seq
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MPLSKHASFRQLATFHAVARLGSVSLAADEMHLTQPAVSIQIGTLEESAGTPLLQRTGRG
IRLTEAGELLAGYAGRILDLWREAGDEMAMLQGVFSGTLRVGAITTAEYLLPPILVNFAK
EHPKVKVKLQVGNRDEIVRMLAGQEIDIAIMGRPPAELKTDSSAFAKHPMAFLAAPSHPL
MSAAKPSIALLSDTRMLVRERGSGTRTTVERFFKDHGLPLRIGSELSSNEAIKQMCAAGF
GIAFLSMHTCVLEMNAGLLGVLPVPGNPVVRDWYVMHLASRQLPQVALAFEEYLRTHGQA
QIQQQLGTLPAARTAARKRSVRRAA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttccaagcacgcgagctttcgccagctcgccactttccacgccgtggcgcgg
ctcggcagcgtttcacttgctgcagacgaaatgcacctgacgcaacccgcggtgtcgata
caaatcggcacactcgaggaatcggccggcacgccgctcctgcagcgcacgggccgtggc
atccgcctgaccgaagcgggcgaattgctggcgggctatgccggccgcatcctcgacctg
tggcgcgaggccggcgacgaaatggccatgctgcagggcgtgttctcgggcaccttgcgc
gtgggcgccatcaccacggccgaatatctgctgccgcccatcctggtgaacttcgccaag
gagcatccgaaggtgaaggtcaagctgcaggtcggcaaccgcgacgagatcgtgcgcatg
ctcgcgggccaggagatcgacatcgccatcatgggccgcccgcccgcagagctgaagacc
gactccagcgccttcgccaagcacccgatggcctttctcgcggcgccctcgcatccgctg
atgtccgcggccaagccgagcatcgccctgctctcggacacgcgcatgctggtgcgcgag
cgcggctcgggcacgcgcaccacggtcgagcgtttcttcaaggaccacgggctgccgctg
cgcatcggctccgagctgtcgagcaacgaggccatcaagcagatgtgcgccgcgggcttc
ggcattgcgtttttgtcgatgcacacctgcgtgctcgagatgaacgccggcctgctgggc
gtgctgccggtgccgggcaatccggtggtgcgcgactggtacgtgatgcacctggcctcg
cggcaattgccgcaggtggcgctggccttcgaggagtatttgcgcacgcatgggcaggcg
cagatccagcagcagctcggcacgctgccggcggcacgcaccgccgcaagaaaacgcagc
gtgcggcgcgcggcctga
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