Variovorax paradoxus B4: VAPA_1c32050
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Entry
VAPA_1c32050 CDS
T02835
Name
(GenBank) transcriptional regulator, LysR family
KO
K13794
LysR family transcriptional regulator, regulatory protein for tcuABC
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c32050
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VAPA_1c32050
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AGU50292
UniProt:
T1XBI6
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All DBs
Position
1:3378688..3379614
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AA seq
308 aa
AA seq
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MELRQLRYFVKVCELRSMGRAAIELGVVTSALSQQISRLEGELSTRLLQRSSTGVVPTDA
GMAFLHQAQLTLRHADDAVRAAQQARLSGHVSVGLAPTTATVLGVPLMRAMQERYPEVRL
HMVEALSGHLTTMLHARQLDLAVLFQTDTPRRWSVAPLLAEKLFVIASPTLGGRPTGTRV
RLSQLADVPLILPSGSHGLRATLMAAFARARIQPRIIAEVDGLALLMDAVRAGYGATVQP
GAATARHDRDDLELTQISDAHVGRRNLLVSLSDDELSPAALAARVVVADTARALVREGRW
TGASLLEN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaggcaactgcgctacttcgtcaaggtctgcgaactccgcagcatgggccgc
gcggccatcgagctgggcgtggtcacctcggcgctgagccagcagatcagccggctcgaa
ggcgagctctccacccggctgctgcagcgcagctcgaccggcgtcgtgcccaccgatgcc
ggcatggccttcctgcaccaggcgcagctcacgctgcgccatgccgacgacgcggtgcgc
gcggcgcagcaggcgcgcctgtcgggccatgtgagcgtgggcctcgcgcccaccacggcc
accgtgctcggcgtgccgctgatgcgcgccatgcaggagcgctaccccgaggtgcggctg
cacatggtcgaggcgctgtcgggccatctcacgacgatgctgcatgcgcgccagctcgac
ctggcggtgctgttccagaccgacacgccgcggcgctggagcgtcgcgccgctgctggcc
gagaagctgttcgtgatcgcatcgccgacgctgggcggacgccccacgggcaccagggtc
cgcctgtcgcagctcgccgatgttccgctgatcctgccgagcggcagccacggcctgcgc
gcaacgctgatggcggcctttgcccgggcccgcatccagccgcgcatcattgccgaggtc
gacggccttgcgctgctgatggacgcagtgcgcgcgggctacggcgccaccgtgcagccc
ggcgccgccacggcccgccacgaccgcgacgacctggagctcacgcagatcagcgatgcg
cacgtgggccgccgcaacctgctcgtgagcctgtccgacgacgagctttcgccggccgcg
ctggccgcacgcgtggtggttgccgacacggcgcgcgccctggtgcgcgagggccgctgg
accggcgcaagtcttctcgaaaactga
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