Variovorax paradoxus B4: VAPA_1c32160
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Entry
VAPA_1c32160 CDS
T02835
Name
(GenBank) non-hemolytic phospholipase C
KO
K01114
phospholipase C [EC:
3.1.4.3
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00562
Inositol phosphate metabolism
vpd00564
Glycerophospholipid metabolism
vpd00565
Ether lipid metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
VAPA_1c32160
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
VAPA_1c32160
00565 Ether lipid metabolism
VAPA_1c32160
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c32160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vpd02042
]
VAPA_1c32160
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.3 phospholipase C
VAPA_1c32160
Bacterial toxins [BR:
vpd02042
]
Type II toxins: Membrane damaging toxins
Toxins that enzymatically damage the membrane
VAPA_1c32160
BRITE hierarchy
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GFIT
Motif
Pfam:
Phosphoesterase
PLipase_C_C
Motif
Other DBs
NCBI-ProteinID:
AGU50303
UniProt:
T1XCL5
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Position
1:complement(3392247..3394499)
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AA seq
750 aa
AA seq
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MNTTNRRDFFRKSAGAIGAASAMTMLPPVIRKALAVEAAVDTGTIQDIKHIVILMQENRS
FDHYFGTLRGVRGFGDRFPIPLASGKPVYFQPNPSGGAEIQPFRRDSRIANALIGSGTPH
NFPDQQAAWNQGKMDRWIQFKNQATMGYYLRDDIPFQFALADAFTICDGYHCSILTGTDP
NRIIFWSGSNFNPELRKKGINSTDTDSEPVNSRCWPSPSSWVAGRGQEADGTGQKDPTTG
AYNYKYVNNAFKWNTLPDVLQKAGISWHIYQNMNNNWTGAMHGCLAFESFRTAQPGSPIY
EHGLTGGPATADGAVNFLAQLKQDVMNGTLPQVSWVLPTQALAEHPGSSEGVAGAADFIS
DVLSALTSNPAVWSKTALFVTFDENDGFFDHLAMPAVPSYDANGELMGKSTVPLDGEYFD
ASVGSYLNAADTTSGKIRPWGLSSRVPTYVVSPWSKGGWVNSQVFDHTSVGRFLEKRFGI
TVDAISPWHRAVCGDLTSCFDFVSPNDPVVPKLPDTSNYPAINAAQRALANTAAVTKAPA
TPQPLYQETGTRFSRALPYELHTSARIEPRGLVSLIFGNTGEQGAVFHVYDKLHLDRIPR
RYTVEAGKQIADYWNTGATDSGKYDLWVYSTNGYVRSFQGDALATDTAAFKPEVQVCYDP
AAGQVYVKVHNAGTGSGTVAVTANAYRADGPWSLDVAAGATGMLHWSLEDSGHWYDFTVT
ADNFERRFAGRVETGKPSVSDPAMALHLKA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaccaaccgtcgcgatttcttccgcaagtcggcgggcgccatcggcgccgca
tcggccatgacgatgcttccgcccgtgatccgcaaggcgctcgccgtcgaggccgctgtc
gacaccggcaccatccaggacatcaagcacatcgtgatcctgatgcaggagaaccgcagc
ttcgaccactacttcggcaccctgcgcggcgtgcgcggcttcggcgaccgcttcccgatt
ccgctggccagcggcaagccggtgtatttccagcccaatcccagcggcggcgcggagatc
cagcccttccgccgcgattccaggatcgcaaatgcgctgatcggatccggcacgccgcac
aacttccctgaccagcaagcggcatggaaccagggaaagatggatcgctggattcagttc
aagaaccaggcgacgatgggctactacctgcgcgacgacattccgttccagttcgcgctg
gccgatgcattcacgatctgcgacggctaccactgttccatcctcaccggcaccgacccg
aaccgcatcattttctggtcgggttccaacttcaacccggagctgcgcaagaagggcatc
aacagcacggacaccgattccgaacccgtcaactcgcgctgctggcccagcccgtcgagc
tgggttgcgggtcgggggcaggaggccgacggcaccggtcagaaagaccccaccaccggg
gcctacaactacaagtacgtcaacaacgccttcaaatggaacacgttgccggacgtactg
cagaaggcaggcatcagctggcacatctaccagaacatgaacaacaactggacgggcgcc
atgcacggctgcctggccttcgagagcttccgcaccgcgcagccgggttcgccgatctat
gaacacggcctgacgggtggccccgcgacggcggacggcgctgtcaatttcctcgcccag
ctcaagcaggacgtgatgaacggcaccctgccgcaggtctcgtgggtgctgcccacgcag
gctctggccgagcatcccggcagcagcgaaggcgttgccggcgccgccgacttcatctcg
gatgtgctgagcgcgctgacgtccaaccccgcggtctggagcaagacggcgctcttcgtg
accttcgacgagaacgacggcttcttcgaccatctggcgatgccggcggtgccgtcgtac
gacgccaatggcgagctgatgggcaagtccaccgtgccgctggatggcgagtatttcgac
gcctccgtgggcagctacctgaacgccgccgacaccaccagcggcaagattcgcccatgg
ggcctgagttcgcgcgtgccgacgtacgtggtgtcgccgtggagcaagggcggctgggtc
aattcgcaagtgttcgaccacacctcggtgggccggttcctggagaagcgtttcggcatc
acggtggacgccatcagcccgtggcatcgcgcggtctgcggcgacctcacctcctgcttc
gacttcgtcagcccgaacgatccggtggtccccaagctgcccgacacgagcaactatccc
gcgatcaatgcagcgcagcgagctctggccaacacggctgccgtgacaaaggcgcccgcc
acgccgcagccgctgtaccaggagaccggcacgcgcttttcgcgcgcgctgccctacgag
ctgcacaccagcgcgcgcatcgagccgcgcggcttggtgtcgctgatcttcggcaacacc
ggcgagcagggcgcggtgttccacgtctacgacaagctgcacctggaccgcattccgcgc
cgctacacggtggaggccggcaagcagattgccgactactggaacaccggcgccaccgac
agcggcaagtacgacctgtgggtctacagcaccaatggctacgtgcgcagcttccagggc
gatgcgctggcgaccgacaccgcggccttcaagcccgaggtgcaggtgtgctacgacccg
gccgcgggccaggtctacgtgaaggtgcacaacgccggcacgggcagcggcacggtcgcg
gtcacggccaacgcctaccgcgccgacggcccctggtcgctcgacgtggctgcgggagcc
acgggcatgctgcactggagcctggaagacagcggccactggtacgacttcaccgtgacc
gccgacaacttcgagcgccgcttcgcgggccgcgtcgagaccggcaagccgagcgtgagc
gatccggcgatggcgctgcacctgaaggcctga
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