Variovorax paradoxus B4: VAPA_1c32630
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Entry
VAPA_1c32630 CDS
T02835
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase AlaS
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VAPA_1c32630 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpd01007
]
VAPA_1c32630 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpd03016
]
VAPA_1c32630 (alaS)
Enzymes [BR:
vpd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
VAPA_1c32630 (alaS)
Amino acid related enzymes [BR:
vpd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
VAPA_1c32630 (alaS)
Transfer RNA biogenesis [BR:
vpd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VAPA_1c32630 (alaS)
Prokaryotic type
VAPA_1c32630 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
CALCOCO1
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
AGU50350
UniProt:
T1XDX3
LinkDB
All DBs
Position
1:complement(3444238..3446862)
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AA seq
874 aa
AA seq
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MSQPTFTVADIRKTFLDFFASKGHTVVASSSLVPGNDPTLMFTNSGMVQFKDVFLGEDKR
PYVRAASVQACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLTWAFELLTQ
VYKLPADKLWATVYIEDDEAYDIWTKEIGLPPERVVRIGDNKGGRYMSDNFWMMADTGPC
GPCSEIFYDHGPEIPGGPPGSPDEDGDRYIEIWNNVFMQFDMQPDGSVRKLPAPCVDTGM
GLERLAAILQHVHSNYEIDIFDALVKAAARETGEKDLGNNSLRVIADHIRATSFLVADGV
IPSNEGRGYVQRRIIRRAIRHGYKLGQKKPFFHKLVPDLVALMGEAYPKLVADEKRITET
LKAEEERFFETLANGMEILDAALAGDAKTLPGEVAFKLHDTYGFPLDLSADVCRERGVSV
DEAGFTAAMEKQKAAGRAAGKFKMDRNVEYGGAGNVFTGYESLEENAKVVALYFEGAAVQ
ELKEGQPGIVVLDTTPFYSESGGQVGDQGVLVAEGVQFGVEDTQKIKADVFGHHGTQTQG
ALKVGDTVRAAVDTARRAATMRNHSVTHLMHKALREVLGGHVQQKGSLVDADKTRFDFAH
NAPVTHDQILEIEKRVNAEILANTETHARVMDMESAQKTGAMMLFGEKYGESVRVLDIGS
SRELCGGTHVGRTGDIGLFKIVSEGGVAAGVRRIEAVTGANALSYLQELEATVQSVAATL
KSPAAELQGRLTQVLEQVRALEREVGSLKGKLASSKGDELLAQAVDVNGIKVLAAKLDGA
DAKTLRDTMDKLKDKLKTAVVVLAAVDGAKVQVAAGVTSDTVGKVKAGELVNFVAQQVGG
KGGGKADMAMAGGTDAAGLPAALQSVQAWVAERT
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcccacattcacggtcgcggacatccgcaagacctttctcgatttcttcgcc
tccaagggccacacggtggtggcctccagctcgctggtgccgggcaacgacccgacgctg
atgttcaccaactcgggcatggtgcagttcaaggacgtgttcctgggcgaagacaagcgc
ccctacgttcgcgccgcctcggtccaggcctgcctgcgcgccggcggcaagcacaacgac
ctggagaacgtgggctacaccgcgcgccaccacaccttcttcgagatgctgggcaactgg
agcttcggcgactacttcaagcgcgaatcgctcacctgggccttcgagctgctgacccag
gtctacaagctgccggccgacaagctctgggccacggtctacatcgaggacgacgaggcc
tacgacatctggaccaaggaaatcggcctgccgcccgagcgcgtggtgcgcatcggcgac
aacaagggcgggcgctacatgtccgacaacttctggatgatggccgacacgggcccctgc
ggcccgtgctccgagattttctacgaccacggccccgagatccccggcggcccgcctggc
agcccggacgaagacggcgaccgctacatcgagatctggaacaacgtgttcatgcagttc
gacatgcagcccgacggctcggtcaggaagctgcccgccccctgcgtggacaccggcatg
ggcctggagcgcctggccgcgatcctgcagcacgtgcacagcaactacgagatcgacatc
ttcgacgcgctcgtcaaggccgccgcgcgcgaaaccggcgagaaggacctgggcaacaac
tcgctgcgcgtgatcgccgaccacatccgcgccacctcgttcctggtggccgacggcgtc
atcccctcgaacgaaggccgcggctacgtgcagcgccgcatcatccgccgggcgatccgc
cacggctacaagctgggccagaagaagccgttcttccacaagctggtgcccgacctcgtg
gcgctgatgggcgaggcctaccccaagctcgtggccgacgagaagcgcatcaccgaaacg
ctgaaggccgaggaagaacgcttcttcgagacgctggccaacggcatggaaattctcgat
gcggccctggccggcgatgcgaagacgctgccgggcgaggtcgccttcaagctgcacgac
acctacggcttcccgctcgacctgtcggccgacgtgtgccgcgagcgcggcgtgagtgtc
gacgaggcgggcttcaccgctgccatggaaaagcagaaggccgcgggccgtgccgccggc
aagttcaagatggaccgcaacgtcgaatacggcggcgcgggcaacgtcttcaccggctat
gaaagcctcgaagaaaacgccaaggtcgtggcgctgtacttcgagggcgccgcggtgcag
gaactgaaggaaggccagcccggcatcgtggtgctcgacaccacgcctttctattccgag
agcggcggccaggtcggcgatcagggcgtgctcgtggccgaaggcgtgcagttcggcgtg
gaagacacgcagaagatcaaggccgacgtgttcggccaccacggcacgcagacccagggc
gcgctcaaggtgggcgacacggtcagggccgcggtcgataccgcgcgccgcgccgccacc
atgcgcaaccactcggtcacgcacctgatgcacaaggccctgcgcgaagtgctgggtggc
cacgtgcagcagaagggctcgctggtcgatgccgacaagacgcgcttcgacttcgcgcac
aacgcacccgtcacgcacgaccagatcctggagatcgagaagcgcgtgaacgccgaaatc
cttgccaacaccgagacgcatgcgcgcgtgatggacatggagtcggcccagaagaccggc
gccatgatgctgttcggcgagaagtacggcgagagcgtgcgcgtgctcgacatcggcagc
agccgcgaactctgcggcggcacccacgtgggccgcaccggcgacatcggcctgttcaag
atcgtgagcgaaggcggcgtggccgccggcgtgcggcgcatcgaagccgtcaccggcgcc
aacgcgctcagctacctgcaagagctcgaagccacggtgcagagcgtggccgccacgctc
aagtccccggccgccgagctgcagggccggctcacgcaggtgctggagcaggtgagggca
ctggagcgcgaggtgggctcgctcaagggcaagctcgcgtcgtccaagggcgacgagctc
ctggcgcaggcggtcgacgtcaacggcatcaaggtgctggccgccaagctcgacggggcc
gacgccaagacgctgcgcgacaccatggacaagctcaaggacaagctcaagacggccgtg
gtcgtgctggccgcggtcgacggcgccaaggtgcaggtggctgcgggcgtcacgagcgac
acggtcggcaaggtcaaggccggcgagctggtcaacttcgtcgcgcagcaggtgggtggc
aagggcggcggcaaggccgacatggccatggccggcggcaccgatgccgcgggcctgccg
gcggcgctccaatcggtgcaagcctgggtggcggaacgcacctga
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