Variovorax paradoxus B4: VAPA_1c33200
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Entry
VAPA_1c33200 CDS
T02835
Name
(GenBank) putative ABC transporter, ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c33200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c33200
Transporters [BR:
vpd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VAPA_1c33200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_16
AAA_29
AAA_21
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AGU50406
UniProt:
T1XD37
LinkDB
All DBs
Position
1:3513167..3515029
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AA seq
620 aa
AA seq
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MFRFFEKLLPPYPAAEPALPPTGFFAFLWACTQGLRLKMAVMAALTAAISGFEALLFAIL
GRIVDWLGGQVPSRLWAERGDTLAWLAALLVISIGVVALQTIVKHQTLAVNLPMRLRWNF
HRVMLGQSMAFYQDEFAGRITAKVMQTALAVRDTLFVLADVVVAMGVYVVTIIVLVTVLD
VQLVLPFIVWLVLYAGALMYFVPRLGKVGKAQADARALMTGRVTDAYTNIATVKLFSHTQ
REAGFAREAMREFMYTGYGQMRLVSAFEIVNHTLSMGLTAGMAGTALWLWSNGTVGVGAV
AAATAMALRLQGMSHWIMWEMTSLFENIGTVQDGMKTLSRPRTVLDAPDAGVLEVPHGEV
RFEHASFRYADAGRRVIDDLNLVVRPGEKIGLVGRSGAGKSTLVNLLLRFHDLESGRILI
DGRDIAHVTQDSLRSHIGMVTQDTSLMHRSVADNIAYGRPDATPAQIEAAARRAEAHDFI
QMLGDASGRRGYEAHVGERGVKLSGGQRQRVAIARVMLKDAPILLLDEATSALDSEVEAA
IQQSLYRLMEGKTVIAIAHRLSTIAAMDRLIVLDEGRVVEEGDHRTLMAQGGLYARLWAH
QSGGFLGDSLEEDDEEALRA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
ttgttccgtttcttcgaaaaactgcttcccccctatcccgcggccgaaccggcgctcccc
ccaacgggcttctttgcgttcctgtgggcctgcacccagggcctgcgcctcaagatggcc
gtcatggcggcactcaccgcggccatctcgggcttcgaggcgctgctgttcgcgatcctc
gggcgcatcgtcgactggctcggcggccaggtgccatcgcggctgtgggccgagcgcggc
gacacgctggcgtggctggccgcgctgctggtgatcagcatcggcgtggtcgcgctgcag
accatcgtcaagcaccagacgctggcagtgaacctgccgatgcgcctgcgctggaacttt
caccgggtgatgctgggccagagcatggccttctaccaggacgagttcgcgggccgcatc
acggccaaggtcatgcagaccgccctggcggtgcgcgacaccctgttcgtgctggccgac
gtggtggtggccatgggcgtgtacgtggtgaccatcatcgtgctcgtgaccgtgctcgac
gtgcagctggtgctgcccttcatcgtctggctggtgctctatgcgggtgcgctgatgtac
ttcgtgccgagactgggcaaggtgggcaaggcgcaggccgacgcgcgtgcgctgatgacc
gggcgcgtgaccgatgcctacaccaacatcgccaccgtcaagctgttctcccacacgcag
cgcgaggccggtttcgcgcgcgaggcgatgcgcgagttcatgtacacgggctacggccag
atgcggctggtgagcgcgttcgagatcgtcaaccacacgctcagcatgggcctgaccgcg
ggcatggccggcaccgcgctgtggctctggtcgaacggcacggtgggcgtgggcgcggtg
gcggcggccaccgcgatggcgctgcgcctgcagggcatgtcgcactggatcatgtgggag
atgaccagcctgttcgagaacatcggcaccgtgcaggacggcatgaagacgctgtcgcgc
ccgcgcaccgtgctcgatgcgcccgatgccggcgtgctcgaggtgccgcacggcgaggtg
cgcttcgagcacgcgagcttccgctatgcggatgcaggccgccgcgtcatcgacgacctg
aacctggtggtgcgcccgggcgagaagatcggcttggtcggccgctcgggcgcgggcaag
tcgacgctggtcaacctgctgctgcgcttccatgacctggagagcggccgcatcctgatc
gacggccgcgacatcgcgcacgtgacgcaggattcgctgcgcagccacatcggcatggtc
acgcaggacacctcgctgatgcaccgctcggtggccgacaacatcgcctacggccggccc
gacgccaccccggcccagatcgaagccgccgcacggcgcgccgaagcgcacgacttcatc
cagatgctcggcgacgccagcggccggcgcggctacgaggcgcatgtgggcgagcgcggc
gtgaagctctcgggcggccagcgccagcgcgtggccattgcgcgcgtgatgctcaaggac
gcgccgatcctgctgctcgacgaggccaccagcgcgctcgactccgaggtggaggccgcc
atccagcagagcctctaccggctgatggaaggcaagaccgtgatcgcgatcgcgcaccgc
ctgtcgaccatcgcggcgatggaccggctcatcgtgctcgacgaaggccgcgtggtggaa
gaaggcgaccaccgcacgctgatggcgcaaggcggactctatgcgcggctgtgggcgcac
cagagcggcggctttctcggcgactcgctcgaagaagacgacgaagaagcgctgcgggcc
tga
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