Variovorax paradoxus B4: VAPA_1c33320
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Entry
VAPA_1c33320 CDS
T02835
Name
(GenBank) putative channel protein, hemolysin 3 family
KO
K11068
hemolysin III
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vpd02042
]
VAPA_1c33320
Bacterial toxins [BR:
vpd02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Other
VAPA_1c33320
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Gene cluster
GFIT
Motif
Pfam:
HlyIII
Motif
Other DBs
NCBI-ProteinID:
AGU50418
UniProt:
T1XCY6
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All DBs
Position
1:3525382..3526002
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AA seq
206 aa
AA seq
DB search
MYPGERLNGYSHLLGLVLALAATALLLAKTLPTGDAARIAGALVFSLSAVVLYAASTLFH
STRGRRKRFWERVDHCAIYLLIAGTYTPFALVTLHGLWGWLLMAAVWGAAFFGIGRELLQ
ASSEASKPPLALYIAMGWLGVLAAVPLAARLDSGGLAWLLAGGVLYTVGTVFYRNRRGFR
HAHGTWHLFVLAGTASHFVSVGWFVL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccggcgaacggctcaacggatacagccatctgctgggcctggtgctcgcactc
gcggccaccgcgctgctgcttgccaagaccctgcccaccggcgacgccgcgcggattgcc
ggcgcgctggtgttctctctctcggcggtggtgctgtatgcggcgtccacgctgttccac
agtacgcgtgggcggcggaagcgtttctgggagcgcgtggaccactgcgccatctacctg
ctgatcgcaggcacctacacgccgttcgcgctggtcacgctgcacgggctctggggctgg
ctgctgatggccgcagtgtggggcgcggccttcttcggcatcgggcgcgagctgctgcag
gcgagcagcgaggcctcgaagccgccgctggcgctctacatcgccatgggctggctcggc
gtgctggccgcggtgccgctggccgcgcggctcgacagcggcgggcttgcgtggctgctg
gccggcggcgtgctctataccgtgggcacggtgttctatcgcaaccggcggggcttccgg
catgcacacggcacctggcacctgttcgtgcttgcagggaccgcgagccacttcgtgtcc
gtgggctggttcgtgctgtga
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