Variovorax paradoxus B4: VAPA_1c33350
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Entry
VAPA_1c33350 CDS
T02835
Name
(GenBank) putative beta-lactamase
KO
K17836
beta-lactamase class A [EC:
3.5.2.6
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00311
Penicillin and cephalosporin biosynthesis
vpd01110
Biosynthesis of secondary metabolites
vpd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00311 Penicillin and cephalosporin biosynthesis
VAPA_1c33350
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VAPA_1c33350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
vpd01504
]
VAPA_1c33350
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.6 beta-lactamase
VAPA_1c33350
Antimicrobial resistance genes [BR:
vpd01504
]
Gene sets
beta-Lactam resistance modules
beta-Lactam resistance, Bla system [MD:
M00627
]
VAPA_1c33350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AGU50421
UniProt:
T1XD52
LinkDB
All DBs
Position
1:complement(3527883..3528782)
Genome browser
AA seq
299 aa
AA seq
DB search
MKSSANRRTFLLAASALPLASACTAWSAKGPRDTAFSSAEAQLAALERSVGGRLGLVAFD
TATGARVQHRATERFPMCSTFKMMASAAILARSTREPGLLERRVSYGRSDILSNSPITEK
HLGQGMTVSALCAATIQYSDNAAANLLMKILGGPSAVTAFARSIGDPVFRLDRWETELNS
AIPGDPRDTTSPEAMAASLQRLVLGDGLGAAQRSQLEAWLLGNTTGATRIRAGVPADWKV
GDKTGAGSYGTVNDIAVLWPPAGAPLVMAVYLTFPTPDAAGRNDVIASAARIAADALRG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatccgccaaccgccgcaccttcctgctcgccgcctccgccttgcctttggcc
agcgcctgtaccgcatggtccgccaaggggccgcgggacaccgcgttttcgagtgccgaa
gcgcagctcgcggccctcgaacgctcagtgggcgggcggctcggcctggtggccttcgac
accgccaccggcgcgcgcgtgcagcaccgcgccaccgagcgcttcccgatgtgcagcacc
ttcaagatgatggcgtccgccgccatcctcgcgcgcagcacccgcgagcccggcctgctg
gagcggcgcgtgagctacggcaggagcgacattctttccaactcgcccatcaccgaaaag
cacctggggcagggcatgacggtctccgcgctgtgcgcagccaccatccagtacagcgac
aacgccgcggccaacctgctgatgaagattctcggcggcccgtccgcggtgactgcattc
gcgcgctccatcggtgacccggtcttcaggctcgatcgctgggagaccgagctcaacagt
gccattccgggcgatccgcgcgacaccacttcgcccgaggccatggccgcgagcctgcag
cgtctggtgctcggcgacgggctcggcgcggcgcagcgcagccagctcgaggcctggctg
ctgggcaacaccaccggcgccacgcgcattcgcgcgggcgtgccggccgactggaaggtg
ggcgacaagaccggcgccggctcctacggcaccgtgaacgacatcgccgtgctgtggccg
ccggccggcgccccgctggtgatggcggtctacctgacctttcccacgcccgatgcggcg
ggccgcaacgacgtcattgcgtcggcggcgcgcatcgcggcggatgcgctgcggggctga
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