Variovorax paradoxus B4: VAPA_1c34640
Help
Entry
VAPA_1c34640 CDS
T02835
Symbol
cydD
Name
(GenBank) thiol reductant ABC exporter, CydD subunit
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c34640 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c34640 (cydD)
Transporters [BR:
vpd02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
VAPA_1c34640 (cydD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_29
SMC_N
nSTAND1
Mg_chelatase
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AGU50548
UniProt:
T1XDB0
LinkDB
All DBs
Position
1:complement(3659180..3660886)
Genome browser
AA seq
568 aa
AA seq
DB search
MIKHPPPRSPLQVFSLPDAASLVQGMAALMWIPQAALLAMAVQGLASGQGISAVQWPACG
ILLLGVLRAVCDAWGARRIFGHARAQLSALRAQTALALAAGSPLDRDRAASGRAASVLAE
QAEALVPYLVRYRPARWRAMVVPVVILVAVASLSWVAALVLLVAAPLIPLFMAIVGWRAK
AASEAQMVELGGMNAFLLDRLRGLATLRALDAVDAAAERLGQAAEALRERTMAVLRIAFL
SSAVLELFSALGVAMVAVYVGFHLLGTLGFGAWGGQLSLGEGLFVLLLAPAFFEPLRELS
AVWHDRAAGEAALQALDALRARALPLPGADAPVARAATGVARAGSAPAIVIRGLHFAWPG
DERQVFDGFDLRIAAGEHVALTGASGAGKTALLSLMAGLLPATRGEISIGGVPLSDRTVG
ALRQRIAWMGQKPHVFAGSVESNVALGRAGVGAPQVAAAMRFASLDTVAQAHPGVALGEG
GIGLSGGEAVRLALARIAVHRHADLLLVDEPTAHLDTETASQVADALLGLARGKTLVVAT
HDPVLAARMNRSICLDAEPADAALERAA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcatcctccgccacggtcgccgctgcaggttttctcgctgccggatgccgca
agcctcgtgcaaggcatggcggcgctcatgtggattccgcaggcggcgctcttggccatg
gccgtgcaggggctggcatcggggcaggggatttcggcggtgcagtggccggcttgcggc
atcctgctgctcggcgtgctgcgggctgtttgcgacgcatggggcgcacggcgcatcttc
gggcacgccagggcgcagctctcggcgcttcgcgcccaaaccgccttggcgctggcggcc
ggttcgccgctggaccgcgaccgtgccgcgtccgggcgtgcggccagcgtgctcgcggaa
caggcggaagcgctggtgccttacctcgtgcgctaccggcccgcgcgctggcgcgcgatg
gtggttccggtcgtcatcctggtggcagtggccagcctttcatgggttgcggcactcgtg
ctgctggttgccgccccgctcatcccgcttttcatggccatcgtcggctggcgcgccaag
gcggcgagcgaggcacagatggtcgagttgggcggcatgaacgccttcctgctcgaccgc
ctgcgcgggctggccacgctgcgcgcgctcgatgcggtggatgccgccgccgagcggctc
gggcaggcggcagaggcgctgcgggaacggaccatggcggtgttgcgcatcgcctttctc
tcgtcggcggtgctggagctcttctcggcgctgggcgttgccatggtggcggtgtacgtc
ggtttccacctgctgggcaccttgggattcggcgcctggggaggccagctgagcctgggg
gaagggctgttcgtcctgctgctcgcgccggcattcttcgaaccgctgcgcgaactctcg
gcggtctggcacgaccgcgcggccggcgaggcggcactgcaggcgctcgacgcgctgcgc
gcccgcgcattgcccttgcctggagcggacgcgccggtcgcacgtgctgcgaccggcgtg
gcccgcgcaggttccgcgcccgccatcgtgatccgcggcctgcatttcgcatggccgggc
gacgagcgccaagtcttcgatggcttcgacctgcgcattgcggccggcgagcacgtggcg
ctcacgggcgcgagcggcgcgggcaagacggcgctgctgtcgctgatggcggggctgctg
ccagccacgcgcggcgagatttccatcggcggcgtgccgttgtccgatcgcaccgtgggt
gcgctgcgccagcgcatcgcctggatgggacagaagccgcatgtgttcgcgggctcggtc
gagtccaacgtcgcactcggacgcgctggcgtgggcgcaccgcaggttgcggccgcgatg
cgcttcgcctccctcgatacggtggcgcaggcgcatccgggcgtggcgctgggcgagggt
ggcatcggcctgtcgggcggcgaggcagtgcgcctagcgctggcgcgcatcgccgtccat
cggcatgccgacctgctgctggtggacgagcccaccgcccacctcgataccgaaaccgcc
agccaggtggccgacgcgctgctgggcctggcgcgcggaaagaccctggtcgtcgccacg
catgacccggtgctggcggcgcgcatgaaccgctctatctgtctcgatgccgagccggcc
gatgcggccttggagcgcgcagcatga
DBGET
integrated database retrieval system
