Variovorax paradoxus B4: VAPA_1c34860
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Entry
VAPA_1c34860 CDS
T02835
Name
(GenBank) putative ABC transporter, substrate-binding protein
KO
K17321
glycerol transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c34860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c34860
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Glycerol transporter
VAPA_1c34860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
PnbB
DUF4148
TssR_C
Motif
Other DBs
NCBI-ProteinID:
AGU50570
UniProt:
T1XEP1
LinkDB
All DBs
Position
1:complement(3683017..3684747)
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AA seq
576 aa
AA seq
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MKMRYTALALAAAMFAAQSASAGEAEAKKWIDSEFQPSTLTKDQQTAELKWFIDAAKKLQ
TKGVKEISVVSETITTHEYESKTLAKAFEEITGIKVKHDLIQEGDVVEKLQTSMQSGKSI
YDGWISDSDLIGTHYRYGKIMNLTDYMAGTGKEWTNPGLDIKDFIGTSFTTAPDKKLYQL
PDQQFANLYWFRADLFDRKDLKDKFKAKYGYDLGVPLNWSAYEDIAEFFSVDVKTIDGKP
IYGHMDYGKKDPSLGWRFTDAWLSMAGTADIGIPNGMPIDEWGIRVADDKCTPVGASVSR
GGATNSPAAVYALTKYIDWMKKYAPKEATGMTFGEAGPVPAQGQIAQQIFWYTAFTADMT
KKGLPVVNEDGTPKWRMAPGPNGPYWKQGMQNGYQDVGSWTFFSAHDANKTAAAWLYAQF
VTSKSVSLKKTIVGLTPIRESDIQSKAMTDMAPKLGGLVEFYRSPARVAWTPTGTNVPDY
PKLAQLWWKNVAEAVTGEKTPQKAMDNLADEMDNVMARLQRAGMAHCAPKLNAKGDPNKW
LSDKNAPWKKLANEKPKGETIEYSKMLTAWKEGKAR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcgctacacggcattggcactggcagcggcgatgttcgccgcgcaaagcgct
tcggcaggcgaagccgaagccaagaaatggatcgacagcgaattccagccgtcgaccctg
accaaggatcagcaaaccgcagagttgaagtggttcatcgatgccgccaagaagctccag
acgaagggcgtcaaggagatttcagtggtgtcggaaaccatcaccacgcacgagtacgag
tcgaagacgctggccaaggccttcgaggaaatcaccggcatcaaggtcaagcacgacctg
atccaggaaggcgacgtggtcgagaagctgcagacctcgatgcagtcgggcaagtcgatc
tacgacggctggatttccgactccgacctgatcggtacgcactaccgctacggcaagatc
atgaacctgaccgactacatggccgggacgggcaaagaatggaccaatccgggtctggac
atcaaggacttcatcggcaccagcttcacgacggcgccggacaagaagctctaccagttg
cccgaccagcagttcgccaacctgtactggttccgcgccgacctgttcgaccgcaaggac
ctgaaggacaagttcaaggccaagtacggctacgacctgggcgtgccgctcaactggagc
gcctacgaggacatcgccgagttcttcagcgtcgacgtgaagaccatcgacggcaagccg
atctacggccacatggactacggcaagaaagatccgtcgctcggctggcgcttcaccgac
gcctggctctcgatggcaggcactgcggacatcggaattccgaacggcatgccgatcgac
gaatggggcatccgcgtggccgacgacaagtgcacgccggtgggcgcctctgtctcgcgc
ggcggtgccaccaattcgccggctgccgtgtatgcgctcaccaagtacatcgactggatg
aagaagtacgcgcccaaggaagccacaggcatgaccttcggcgaagccgggccggtaccg
gcccagggccagatcgcacagcagatcttctggtacacggccttcacggccgacatgacc
aagaagggcctgcccgtggtgaacgaggacggcacgcccaagtggcgcatggcgcccggc
ccgaacggcccgtattggaagcagggcatgcagaacggctaccaggacgtgggctcgtgg
accttcttcagtgcccacgacgccaacaagaccgccgcagcctggctctacgcccagttc
gtcacgtccaagagcgtctcgctcaagaagaccatcgtgggcctgaccccgatccgcgaa
tcggacatccagtcgaaggcaatgaccgacatggcgcccaagctcggcggcctggtcgag
ttctaccgcagcccggcccgcgtggcatggacgcccaccggcaccaacgtgcccgactat
ccgaagctcgcgcagctctggtggaagaacgtggccgaggccgtcacgggcgagaagacc
ccgcagaaggcaatggacaacctggccgacgagatggacaacgtgatggcccgcctgcag
cgcgccggcatggcccattgtgcgcccaagctcaatgccaagggcgatccgaacaagtgg
ctgagcgacaagaacgccccgtggaagaagctggccaacgagaagcccaagggcgagacg
atcgagtacagcaagatgctgacggcctggaaggaaggcaaggcgcgctga
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