KEGG   Variovorax paradoxus B4: VAPA_1c35350
Entry
VAPA_1c35350      CDS       T02835                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase 4, subunit B ParE
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpd03032]
    VAPA_1c35350 (parE)
   03036 Chromosome and associated proteins [BR:vpd03036]
    VAPA_1c35350 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vpd02048]
    VAPA_1c35350 (parE)
Enzymes [BR:vpd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     VAPA_1c35350 (parE)
DNA replication proteins [BR:vpd03032]
 Prokaryotic type
  DNA Topoisomerases
   VAPA_1c35350 (parE)
Chromosome and associated proteins [BR:vpd03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    VAPA_1c35350 (parE)
Prokaryotic defense system [BR:vpd02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    VAPA_1c35350 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: AGU50619
UniProt: T1XE88
LinkDB
Position
1:complement(3738607..3740604)
AA seq 665 aa
MATPPKTPPSSSSASSGYSEGSIRVLKGLEPVKQRPGMYTRTDNPLHIIQEVLDNAADEA
LAGHGKKIKVTLHTDGSVSIEDDGRGIPFGMHPEEKAPVVELVYTRLHAGGKFDKGSGGA
YSFSGGLHGVGVSVTNALSKRLEVVTHREGSAAKLAFSGGDVIEALEIRKLEAGERKQGT
TVRAWPDAKYFETAALPMSELTHLLRSKAVLMPGVSVTLTVEKTKETQQWLYKGGLSDYL
MQTLNGDPVIPLFEGSGHADKNADNFAEGEGADWCVAFTEDGQPVRESYVNLIPTSAGGT
HESGLRDGLFTAVKGFIELHSLLPKGVKLLPEDVFARASYVLSAKVLDPQFQGQIKERLN
SRDAVRLVSSFVRPALELWLNQHVDYGRKLAELAIKAAQTRQRAGQKVEKRKGSGVAVLP
GKLTDCESKDISHNEVFLVEGDSAGGSAKMGRDKESQAILPLRGKVLNTWEVERDRLFAN
TEIHDISVAVGVDPHGPADTPDMSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLI
EAGHVYVAKPPLFRVDAPARGKKPASKVYALDEGELTATLDKLRKDGVREGAWSISRFKG
LGEMSAEQLWETTLNPDTRRLMKVQLGRFDFTSTQGEITKLMGKGEAAARRELMELRADD
VDIDV
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggcgactccccccaagactccccccagttcatcgtccgcgtcctccgggtactcggaa
ggttctatccgcgtgctcaagggcctcgagcccgtgaagcagcgtcccggcatgtacacc
cggaccgacaacccgctgcacatcatccaggaagtgctcgacaacgccgccgacgaagcg
ctggcgggccatggcaagaagatcaaggtcacgttgcacacggacggctcggtcagcatc
gaggacgacggccgcggcatccccttcggcatgcaccccgaggaaaaggctcccgtggtc
gaactggtgtacacccggctgcacgccggcggcaagttcgacaagggctcgggcggcgcc
tacagcttctcgggcggcctgcacggcgtgggcgtgtcggtgaccaatgcgctgtcgaag
cgtctcgaagtggtgacccaccgcgagggctcggcggccaagctcgccttcagcggcggc
gatgtgatcgaggcgctcgaaatccgcaagctcgaggccggcgagcgcaagcagggcacc
accgtgcgtgcctggcccgacgccaagtacttcgagaccgccgccctgccgatgagcgag
ctcacccacctgctgcgcagcaaggccgtgctgatgccgggcgtaagcgtcacgctcacg
gtcgagaaaaccaaggaaacgcagcagtggctctacaagggcggcctgagcgactacctg
atgcagacgctcaacggcgacccggtgatcccgctgttcgaaggcagcggccatgccgac
aagaacgccgacaacttcgccgaaggcgagggcgccgactggtgcgtggccttcaccgaa
gacggccagccggtgcgtgagagctacgtcaacctgattcccaccagcgccggcggcacg
cacgagagcggcctgcgcgacggcctcttcaccgcggtgaagggcttcatcgagctgcat
tcgctgctgcccaagggcgtgaagctgctgcccgaggacgtgttcgcacgcgcttcgtac
gtgctgagcgccaaggtgctcgacccgcagttccagggccagatcaaggagcgcctcaat
tcgcgcgatgccgtgcgcctggtgtcgagcttcgtgcgccctgcgctcgaactctggctc
aaccagcacgtcgactacggaaggaagctcgccgagctggccatcaaggccgcgcagacg
cgccagcgcgccggccagaaggtcgagaagcgcaagggctccggcgtggccgtgctgccc
ggcaagctgaccgattgcgagagcaaggacatcagccacaacgaagtcttcctggtcgag
ggcgactcggccggcggcagcgccaagatgggtcgcgacaaggaaagccaggccatcctg
ccgctgcgcggcaaggtactcaatacgtgggaagtggagcgcgaccggctttttgccaac
accgaaatccacgacatctcggtggccgtgggcgtcgacccgcacggtcccgccgacacg
cccgacatgagcgggctgcgctacggcaagatctgcatcctttccgatgccgacgtggac
ggctcgcacatccaggtgctgctgctcacgctgttcttccgccactttccgaaactcatc
gaagccggccatgtgtatgtcgcaaagccgccactgttccgcgtcgatgcgcccgcgcgc
ggcaagaagccggcctcgaaggtttatgccctcgacgagggcgaactcaccgccacactc
gacaaattgcgtaaagatggcgtgcgcgaaggcgcctggagcatcagccgcttcaagggc
ctgggcgaaatgagcgcggaacaattgtgggaaaccacgctcaatccggatacccggcgc
ctgatgaaggtgcaactggggcgcttcgacttcacctccacccagggcgagatcaccaag
ctgatgggcaagggcgaggctgccgcccggcgcgaactgatggaactgcgcgccgacgat
gtcgatatcgatgtttga

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