Variovorax paradoxus B4: VAPA_1c35680
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Entry
VAPA_1c35680 CDS
T02835
Name
(GenBank) putative iron-sulfur cluster binding protein
KO
K18979
epoxyqueuosine reductase [EC:
1.17.99.6
]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpd03016
]
VAPA_1c35680
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.99 With unknown physiological acceptors
1.17.99.6 epoxyqueuosine reductase
VAPA_1c35680
Transfer RNA biogenesis [BR:
vpd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VAPA_1c35680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_16
QueG_DUF1730
Fer4_9
Fer4_7
Fer4_10
Fer4
HEAT_2
HEAT_EZ
Fer4_21
Fer4_18
Fer4_6
Motif
Other DBs
NCBI-ProteinID:
AGU50652
UniProt:
T1XCL3
LinkDB
All DBs
Position
1:complement(3767010..3767975)
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AA seq
321 aa
AA seq
DB search
MQWLAHGFHGEMKYMATHGTRRARPAELVPGTVSVITARMDYLPRDTPLDDWQAVEFDRL
ARPGEAIVSVYARGRDYHRVLRARLARLAERIAEEVGPFGHRAFTDSAPVLEAELASRSG
QGWRGKHTLVLDRSAGSMFFLGEIYVDMALPESEPVTAHCGSCSACIDVCPTKAIVAPYR
LDARRCISYLTIEHGGPIPLELRPLMGNRIYGCDDCQLICPWNKFAKKSALPDFDAREGL
TGQALASLFAWSEEDFLRFTQGSPIRRIGHERWLRNIAVALGNALRAGESGAAEALATRA
SDPSELVREHVAWALAQRPER
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggctggcccatgggttccatggcgagatgaaatacatggcaacgcatggcacg
cgccgcgccaggccggccgaactggtgccgggcacggtgagcgtcatcacggcacgcatg
gactacctgccgcgcgacacgccgctcgacgattggcaggccgtggaattcgatcgcctc
gcgcggcccggcgaagccatcgtctcggtctatgcgcgcggccgcgattatcacagggtg
ctgcgtgcgcggctggccaggctggccgagcgcattgccgaggaggtggggccattcggg
catcgcgccttcaccgattcggccccggtgctcgaagccgagctcgcatcccgcagcggc
cagggctggcgcggcaagcacacgctggtgctggaccgcagcgcgggctcgatgttcttc
ctgggcgagatctacgtcgacatggcattgcccgaaagcgagccggtcaccgcgcactgc
ggcagctgcagcgcctgcatcgacgtctgcccgacaaaggccatcgtcgcgccgtaccgg
ctcgatgcgcggcgctgcatttcgtacctgaccatcgagcacggcggaccgattccgctg
gagcttcggcccctgatgggcaaccgcatctacggctgcgacgactgccagctgatctgc
ccctggaacaagttcgcgaagaagagcgcgctgcccgacttcgatgcgcgcgaagggctc
accggccaggcgctggcttcgctctttgcctggagcgaggaagattttctgcgcttcacc
caaggcagccccatccggcgcatcgggcatgaacgctggctgcgcaacatcgccgtggca
ctgggaaacgcgctgcgcgcgggcgagagcggcgccgcggaggccctggccacgcgggcc
tcggaccccagcgaactggtgcgcgagcacgtggcgtgggcgctggcgcagcgccccgaa
cgctga
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