Variovorax paradoxus B4: VAPA_1c35930
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Entry
VAPA_1c35930 CDS
T02835
Name
(GenBank) putative ABC transporter, branched-chain amino acid-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c35930
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c35930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c35930
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c35930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
DUF6422
Motif
Other DBs
NCBI-ProteinID:
AGU50676
UniProt:
T1XDW6
LinkDB
All DBs
Position
1:complement(3796599..3797795)
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AA seq
398 aa
AA seq
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MQTKLKIIALMLGAAGLASHAVQAQEKVVIGYISDLSGLYADLEGKGGATAIQMAIDDMG
GKVLGQPVEVLSVDHQNKPDIAASKAREWIDTAGATMIFAGTNSGVALATAKVAQEKKRV
FFTNGAATSALTNAQCSPYTVHYAYDTVALAKSTGGAVVDTGGKSWFFLTADYAFGHALE
GDTAKVVKAKGGTVVGTVRAPLNASDFSSFLLQAQNSKAQVLGLANAGGDFINSMKASKE
FGIDKSMKIAGLLVFLTDVKSLGLPATQGLLHTTSWYWDADDESRKWAARYEAKTKNKPT
DIQAADYSATMAYLKAVEAVKSTDADKVMAYLKKTPINDFYAKGVIRADGRMVHDMLLAE
VKKPSESKGPWDLLKIVKKVPGDQVYTTKEESTCALWK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaagctcaaaatcattgccctcatgctcggggccgcgggtcttgcgagccat
gccgtgcaggcgcaggagaaggtcgtcatcggctacatcagcgacctgtcgggcctgtac
gccgacctggaaggcaagggcggcgcaacggccatccagatggccatcgacgacatgggc
ggcaaggtgctcggccagccggtggaggtgctgagcgtcgaccaccagaacaagcccgac
atcgcggcctcgaaggcgcgcgagtggatcgacaccgccggcgccacgatgatcttcgcg
ggcaccaattcgggcgtggcgctggccaccgccaaggtggcgcaagagaagaagcgcgtg
ttcttcaccaacggcgcggccacctcggcgctcaccaacgcgcagtgcagcccctacacc
gtgcactatgcctacgacaccgtcgcactggccaagagcaccggcggcgccgtggtcgac
accggcggcaagagctggttcttcctgacggccgactatgccttcggccatgcgctcgag
ggcgacaccgccaaggtcgtcaaggccaagggcggcacggtggtgggcacggtgcgggcg
ccgctcaatgcgtcggacttctcttccttcctgctgcaggcgcagaactccaaggcgcag
gtgctggggctggccaacgccggcggcgacttcatcaactcgatgaaggcgtcgaaggaa
ttcggcatcgacaagtcgatgaagatcgcaggcctgctggtgttcctcaccgacgtgaag
agcctgggcctgccggccacgcaggggctgctgcacaccaccagctggtactgggacgcc
gacgacgagtcgcgcaagtgggccgcgcgctacgaagccaagaccaagaacaagccgacc
gacatccaggccgccgactactcggccaccatggcctacctcaaggccgtggaggcggtg
aagagcaccgacgccgacaaggtcatggcctacctcaagaagacgccgatcaacgacttc
tatgccaagggcgtgatccgcgccgacggccgcatggtgcacgacatgctgctggcggag
gtcaagaagccttccgaatccaagggcccgtgggacctgctgaagatcgtcaagaaggtg
ccgggcgaccaggtctacacgaccaaggaagaaagcacctgcgcactctggaagtag
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