Variovorax paradoxus B4: VAPA_1c35940
Help
Entry
VAPA_1c35940 CDS
T02835
Name
(GenBank) high-affinity branched-chain amino acid ABC transporter, ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c35940
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c35940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c35940
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c35940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_22
FR47
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AGU50677
UniProt:
T1XCN3
LinkDB
All DBs
Position
1:complement(3797854..3798570)
Genome browser
AA seq
238 aa
AA seq
DB search
MTAALEIKGLHAWYGESHVLHGVDMVVQPGEVVTLLGRNGAGRTSTLRAIMGLTGSRKGS
IEVNGVQTVGMATHRIAHLGIGYCPEERGIFASLSAEENLLLPPTLKNVKGAGPGMSVAE
IYEMFPNLAERRNSPGTRLSGGEQQMLAVARILRTGAKLLLLDEISEGLAPVIVQALARM
IHTLRGKGYTIVMVEQNFRFAAPLADRFYVMEHGRMVEAFGAKELDAKMPVLSELLGV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgccctggaaatcaaaggcctccacgcctggtacggcgaatcgcacgtgctg
cacggcgtcgacatggtggtgcagcccggcgaggtcgtcacgctgctcgggcgcaacggc
gccgggcgcaccagcacgctgcgcgccatcatgggcctgaccggctcgcgcaagggcagc
atcgaagtcaacggcgtgcagaccgtcggcatggccacgcaccgcatcgcgcacctgggc
atcggctattgccccgaagagcgcggcatcttcgcgagcctctcggccgaggaaaacctg
ctgctgccgccgacgctcaagaacgtcaagggtgcggggccgggcatgtcggtggccgag
atctacgaaatgttcccgaacctggccgagcgccgcaacagccccggcacgcggctgtcg
ggcggcgagcagcagatgctggcggtcgcacgcatcctgcgcaccggcgccaagctgttg
ctgctcgacgaaatctccgaaggcctcgcgcccgtcatcgtgcaggccctcgcccggatg
atccacaccctgcgcggcaagggctacaccattgtgatggtggagcagaacttccgcttc
gccgcgccgctggccgaccgtttctacgtgatggagcacggccgcatggtcgaggccttc
ggcgccaaggagctcgacgccaagatgcccgtgctcagcgagctgctgggcgtgtag
DBGET
integrated database retrieval system
