Variovorax paradoxus B4: VAPA_1c35950
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Entry
VAPA_1c35950 CDS
T02835
Name
(GenBank) high-affinity branched-chain amino acid ABC transporter, ATP-binding protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c35950
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c35950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c35950
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c35950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_22
SMC_N
AAA_29
AAA_15
AAA_30
AAA_23
AAA_27
SRP54
Motif
Other DBs
NCBI-ProteinID:
AGU50678
UniProt:
T1XDP8
LinkDB
All DBs
Position
1:complement(3798572..3799342)
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AA seq
256 aa
AA seq
DB search
MSDVILETRQLTKEFKGFTAVSKVDLSVVRGSIHALIGPNGAGKTTCFNLLTKFLEPTSG
TILFNGHDITGERPAQIARRGIIRSFQISAVFPHLTLLENVRLGLQRALGTSYHFWKSEK
TLKPLDARARELLAEVGLAHEADELTVNLPYGHKRALEIATTLAMDPELMLLDEPTQGMG
HEDVHRVAELIKRVSAGRTILMVEHNMSVVSTIADTITVLQRGAVLAEGPYAEVSKNPQV
MEAYMGTTDGQLQGAH
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtcatcctcgaaacacgccagctcaccaaggaattcaaggggttcactgcg
gtcagcaaggtcgatctctcggtggtgcgcggctcgatccatgcgctgatcggcccgaac
ggcgccggcaagaccacctgcttcaacctgctcaccaagtttctcgaacccaccagcggc
acgatcctgttcaacgggcacgacatcaccggcgagcggccggctcagatcgcgcggcgc
ggcatcatccgctcgttccagatctcggcggtgtttccgcacctcacgctgctggagaac
gtgcgcctcgggctgcagcgcgcgctcggcacttcgtaccatttctggaagagcgagaag
acgctcaagccgctcgatgcacgcgcccgcgaactgcttgcggaggttggcctggcgcac
gaggccgacgaactcacggtgaacctgccctacggccacaagcgcgcgctcgagatcgcc
accacgctggccatggaccccgagctgatgctgctcgacgagcccacgcagggcatgggc
catgaagacgtgcaccgcgtggccgaactcatcaagcgcgtgtcggccggccgcaccatc
ctgatggtcgagcacaacatgagcgtggtctcgaccatcgccgacaccatcacggtgctg
cagcgcggcgccgtgctggccgaagggccgtacgccgaagtctcgaagaacccgcaggtg
atggaggcctacatgggcaccaccgacggccagctccaaggggcgcattga
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