Variovorax paradoxus B4: VAPA_1c36260
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Entry
VAPA_1c36260 CDS
T02835
Name
(GenBank) putative Leu/Ile/Val-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c36260
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c36260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c36260
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c36260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
Gcn1_N
Motif
Other DBs
NCBI-ProteinID:
AGU50708
UniProt:
T1XDS5
LinkDB
All DBs
Position
1:complement(3830373..3831653)
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AA seq
426 aa
AA seq
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MNPPFIWRRKALKFAALALCAAPFAAQAQTPPAPIRLALIESMSGPFANTGEAVFRNLLW
AVERVNARGGVKLPGGARPLQLDRYDSKGQNEEALSALRAAMDDGARIVLQGNSSATAAA
LVDAIEKNNERDPARRVIFLNYAAVDPALTNDRCSFWHFRFDAHADMRVAALMEVVKDDA
AIKRAYLIGQDYSFGQAVLRESKRQLGVQRPDVEIVAEELHPMGKVKDFAPYASKIIASG
AQAVFTGNWGNDLTLLVKAAREAGFNGTFYTFYGNALGAPAAIGDAGIGRVIAVADWLPN
VQTAQSEAFYRAFRTRFPKPADDYVHMRMQLLVESLAQSIARAGSVDAVAVARALEQADV
SLYGQRGRMRAADHQFQQQLVVGVMDKQGRPGVQFDVEGSGYGFRVVKTIAPERAELPTT
CKMKRI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccccctttatttggcgtcgcaaggccttgaaatttgcggcgctggcgctatgc
gcggcccccttcgcagcgcaggcgcagacaccgcccgcgcccatccgtctcgcgttgatc
gaaagcatgagcgggccgttcgccaataccggcgaggcggtgtttcgcaatctgctgtgg
gccgtggagcgcgtgaatgcgcgcggcggcgtcaagctgcccggcggggcgcggccgctg
cagctcgaccgctacgacagcaaggggcagaacgaagaagcgctgtcggcgctgcgtgcg
gccatggacgacggcgcgcgcatcgtgctgcagggcaattcgtcggccaccgccgcggcg
ctggtcgatgccatcgagaagaacaacgagcgcgatcccgcgcggcgcgtgatcttcctc
aactacgcggcggttgatccggcgctgaccaacgaccgctgcagcttctggcactttcgc
ttcgacgcccatgccgacatgcgcgtggccgcgctgatggaagtggtgaaggacgatgcg
gccatcaagcgcgcctacctgatcgggcaggactacagcttcggccaggcggtgctgcgc
gaatcgaagcggcaactcggcgtgcagcggcccgacgtggagatcgtcgcggaagagctc
catccgatgggcaaggtgaaggacttcgcgccctacgccagcaagatcatcgcgagcggc
gcgcaggccgtgttcaccggcaactggggcaacgacctcacgctgctcgtgaaggccgcg
cgcgaggccggcttcaacggcaccttctataccttctatggcaacgcgctcggcgcgccg
gcggccatcggcgacgcaggcatcggccgcgtgatcgcggtggccgactggctgcccaac
gtgcagaccgcgcagtccgaggccttttatcgcgccttccgcacgcgctttccgaaaccc
gccgacgactacgtgcacatgcgcatgcaattgctagtggagtcgcttgcgcaatcgata
gcgcgtgcgggcagcgtcgacgcggtggccgtggcgcgcgcgctcgagcaggccgacgtg
agcctctacggccagcgcggccgcatgcgcgcggcggaccatcagttccagcagcagctg
gtggtcggcgtgatggacaagcagggcaggccgggcgtgcagttcgatgtcgagggttcg
ggctacggctttcgcgtggtcaagaccatcgctcccgaacgcgccgaactgccgaccacc
tgcaaaatgaaaagaatctag
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