Variovorax paradoxus B4: VAPA_1c36370
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Entry
VAPA_1c36370 CDS
T02835
Name
(GenBank) nitrite reductase [NAD(P)H], large subunit
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00910
Nitrogen metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01310
Nitrogen cycle
Module
vpd_M00531
Assimilatory nitrate reduction, nitrate => ammonia
vpd_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
VAPA_1c36370
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
VAPA_1c36370
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Rubredoxin_C
Pyr_redox
NIR_SIR_ferr
Pyr_redox_3
NAD_binding_9
NAD_binding_7
AlaDh_PNT_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AGU50719
UniProt:
T1XEH4
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All DBs
Position
1:3843527..3846013
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AA seq
828 aa
AA seq
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MMKKLNLVMVGNGMAGVRTLEELLKLAPELYDITVFGAEPHPNYNRILLSPVLAGEQTVE
EIVLNSWEWYTDNHITLHAGKKVVEVDRVKRIVRAVDAQGGVTEAPYDRLLMCTGSNPFM
LPVPGKDLKGVIAYRDIADTDYMIEAARTHKSAVVIGGGLLGLEAANGLMLRGMDVTVVH
VMPWLMERQLDDVAGKLLQKSLEDRGLKFLIGAQTQELVGDSNEGKDGRVKAIRFKDGTE
VAADLVVMAVGIRPNTELAERMRLHCQRGIVVTDTMQTVTDARIYSVGECAAHRGIAYGL
VAPLFEQAKVAANHLAQFGIGRYLGSLTSTKLKVTGIDLFSAGEFMGGEGTEEIVMSDPF
GGVYKKLVIKDDKLVGACLYGDTVDGSWYFKLLRDGRSVGDIRDKLMFGESNIGDTGHEG
HSKAASMPDEAEVCGCNGVTKGTICKAIKDKGLFTLDEVKKHTKASASCGSCTGLVEQIL
MFTAGGDYSATPKKKAVCGCTDANHQDVRDAIRKEHYLTHDAVYRNLGWRTPNGCATCRP
AINYYLISTWPKEAKDDPQSRFINERSHANIQKDGTYSVIPRMWGGHTTPDELRRIADAA
DKYKIPTVKVTGGQRIDLLGVKKEDLEGVWKDIGMPSGFAYAKSLRTVKTCVGSEWCRFG
TQDSTQMGKDLERALWAMYSPHKVKLAVSGCPRNCAEAGIKDVGVIGVDSGWELYVGGNG
GIKTEVAQFLVKVKTAAEVMEYSGAFLQLYREEGWYLERTVHYIGRVGLDYVKKKILEDE
AGRKALWERLQFALDGEPDPWFESSQASVDVRQFTPVAVVDDNATQAA
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaaactcaacctcgtgatggtcggcaacggcatggccggcgtgcgcacgctc
gaagagctcctgaagctcgcgccggagctgtacgacatcaccgtcttcggtgccgagccg
catcccaactacaaccgcatcctcttgtcgcccgtgctcgcgggcgagcagaccgtggag
gagatcgtgctcaacagctgggagtggtacaccgacaaccacatcaccctgcacgccggc
aagaaggtggtcgaggtcgaccgcgtgaaacgcatcgtgcgcgccgtggatgcgcaaggt
ggcgtcaccgaagccccttacgaccgcctgctcatgtgcaccggctccaaccccttcatg
ctcccggtgcccggcaaggacctcaagggcgtcatcgcctaccgcgacatcgccgacacc
gactacatgatcgaggccgcgcgcacccacaagagcgcggtcgtcatcggcggcggcctg
ctgggcctggaagcggccaacggcctgatgctgcgcggcatggacgtcaccgtggtgcac
gtcatgccctggctgatggagcgccagctcgacgacgtcgcgggcaagctgctgcagaag
tcgctggaagaccgcggcctgaagttcctgatcggtgcccagacccaggagctcgtcggt
gacagcaatgagggaaaggatggccgggtcaaggccatccgcttcaaggacggcaccgaa
gtggccgccgacctggtcgtcatggccgtgggcatccgccccaataccgagctggccgag
cggatgcgcctgcactgccagcgcggcatcgtcgtcaccgacaccatgcagaccgtgacc
gacgcgcgcatctactcggtcggcgaatgcgcggcccaccgcggcatcgcctacggcctg
gtcgcccccctcttcgagcaggccaaggtcgcggccaaccacctggcccagttcggcatc
gggcgctacctgggctcgctgacctccaccaagctcaaggtcaccggcatcgacctcttc
tccgccggcgagttcatgggcggcgagggcaccgaggagatcgtcatgagcgaccccttc
ggcggggtctacaagaagctggtgatcaaggacgacaagctggtgggcgcctgcctgtac
ggcgacacggtggacggcagctggtacttcaagctgctgcgcgacgggcgcagcgtgggc
gacatccgcgacaagctgatgttcggcgaatcgaacatcggcgacaccggccacgagggc
cacagcaaggccgccagcatgcccgacgaggccgaggtgtgcggctgcaacggcgtgacc
aagggcaccatctgcaaggccatcaaggacaagggcctgttcaccctggacgaggtcaag
aagcacaccaaggccagcgccagctgcggctcgtgcaccgggctggtcgagcagatcctg
atgttcaccgccggcggcgactactcggccacgcccaagaagaaggcggtgtgcggctgc
accgacgccaaccaccaggacgtgcgcgacgcgatcaggaaggaacactacctcacgcac
gacgcggtctaccgcaacctgggctggcgcacgcccaacggctgcgccacctgccgcccg
gccatcaactactacctgatcagcacctggcccaaggaggccaaggacgatccgcagagc
cgcttcatcaacgagcgcagccacgccaacatccagaaggacggcacctactcggtcatt
ccccggatgtggggcggccacaccacgcccgacgagctgcggcgcatcgcggatgcggcc
gacaagtacaagatcccgacggtgaaggtcacgggcggccagcgcatcgacctgctgggg
gtgaagaaggaggacctggaaggcgtgtggaaggacatcggcatgccctcgggctttgcc
tatgccaagagcctgcgcacggtgaagacctgcgtgggcagcgagtggtgccgcttcggc
acgcaggactccacccagatgggcaaggacctggagcgcgcgctgtgggcgatgtactcg
ccgcacaaggtcaagctggcggtctcgggctgcccgcgcaactgcgccgaggcggggatc
aaggacgtgggggtgatcggggtggattcgggctgggagctgtatgtgggcggcaacggc
ggcatcaagaccgaggtggcgcagttcctggtgaaggtgaagacggccgccgaggtgatg
gagtattcgggcgccttcctgcagctgtaccgcgaggaaggctggtacctggagcgcacg
gtgcactacatcgggcgggtggggctggactacgtgaagaagaagatcctcgaagacgaa
gccggccgcaaggcgctgtgggagcggctgcagttcgcgctcgatggcgagcccgatccg
tggttcgagtcgagccaggcgtccgtcgatgtgcggcagttcacgccggtggcggtggtg
gatgacaacgcaacgcaggccgcctga
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