KEGG   Variovorax paradoxus B4: VAPA_1c37610
Entry
VAPA_1c37610      CDS       T02835                                 
Name
(GenBank) transcriptional regulator, LysR family
  KO
K14057  LysR family transcriptional regulator, regulator of abg operon
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vpd03000]
    VAPA_1c37610
Transcription factors [BR:vpd03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    VAPA_1c37610
SSDB
Motif
Pfam: LysR_substrate HTH_1 HTH_24 HVO_A0261_N MarR_2 HTH_23 Cro HTH_28 MarR HTH_Tnp_ISL3 HTH_50 FilR1_N HTH_3 HTH_29 I-HmuI_NUMOD-like
Other DBs
NCBI-ProteinID: AGU50843
LinkDB
Position
1:complement(3981365..3982270)
AA seq 301 aa
MKPNQLHAFVAVVEQMSIRAAARMLGLSQPAVTKIVRELEREVGAPLVERSVKGVRLTEY
GEAFAPRARLLLADMRRARDEIAQIRDGVKGTVSMAVSASFALTVLPVAFKDFHTRLPAV
HVQFSEAVLPMMLSRLREGYLDFAVAHVVPGTLDAEFEALELFPVQLVIGMRERHPLRAS
RSLRELYTAEWILPGDGDHFAGRDTISPLLPLGLPPPARVIQGQSVTVALALVGTMDLIG
MFVEPLVRLAFKRHGIRRVEVEEPLPVLSVCVIRRRGQLLTPAAQYFVECIQRASLAATN
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaacccaatcagttgcatgccttcgtggcggtggtcgagcagatgagcatccgcgcc
gcggcgcgcatgctggggctttcgcagcccgcggtgaccaagatcgttcgcgagctggag
cgcgaggtgggcgcgccgctggtggagcgcagcgtcaagggcgtgcgactcaccgaatac
ggcgaggcctttgcgccgcgtgcgcggctgctcctggccgacatgcggcgcgcgcgcgac
gagatcgcgcagatccgcgacggcgtcaagggcacggtatcgatggctgtgagcgcctcg
ttcgcgctcacggtgctgcccgtggcgttcaaggatttccacacccgcctgcccgcggtc
catgtgcagttcagcgaggccgtgctgccgatgatgctgtcgcggctgcgcgagggctac
ctggatttcgcggtcgcgcatgtggtgcccggcacgctcgacgcggagttcgaggcgctc
gaactctttccggtgcagctggtgatcggcatgcgcgagcggcatccgctgcgcgcgagt
cggtcgctgcgcgagctgtacaccgccgaatggatcttgcccggcgacggcgaccacttc
gcaggtcgcgacacgatctcgccgctgctgccgctcggcctgccaccgccggcgcgcgtg
atccaggggcagtcggtcaccgtggcgctcgcattggtgggcaccatggacctgatcggc
atgttcgtggagccgctggtgcgcctggccttcaagcgccacggcatccgccgggtcgag
gtggaggagccgctgcccgtgctcagcgtgtgcgtgatacgccggcgcggccagctgctg
acgccggccgcgcagtacttcgtcgagtgcatccagcgcgcgtccttggctgcgacgaat
gcctga

DBGET integrated database retrieval system