Variovorax paradoxus B4: VAPA_1c38030
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Entry
VAPA_1c38030 CDS
T02835
Name
(GenBank) ABC transporter, ATP-binding protein, ChvD family
KO
K06020
energy-dependent translational throttle protein EttA
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpd03016
]
VAPA_1c38030
Transfer RNA biogenesis [BR:
vpd03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
VAPA_1c38030
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
MMR_HSR1
AAA_29
AAA_18
RsgA_GTPase
AAA_23
AAA_22
AAA_14
Dynamin_N
AAA_28
APC_basic
Motif
Other DBs
NCBI-ProteinID:
AGU50885
UniProt:
T1XFI8
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Position
1:complement(4018078..4019739)
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AA seq
553 aa
AA seq
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MAQYVYSMNRVSKTVPPKRQLLKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGVDKEFE
GEALPMPGMTIGYLEQEPKLNPEHTVRESVEESMGAVFAAKARLEEVYIAYGAEDADFDA
LAAEQAQLEAIIATAGTDSEHQLEIAADALRLPPWDAKIGLLSGGEKRRVALCRLLLSKP
DMLLLDEPTNHLDAESVEWLEVFLQRFTGTVVAITHDRYFLDNAAEWILEMDRGRGIPWK
GNYSTWLEQKGERLAQEQKSEEAHAKALKKELEWSRQNPKARQAKSKSRLARFEELSDME
YQKRNETQEIFIPVAERLGQQVFEFHGVSKSFGDRMLIDNLSFTVPPGAIVGIIGPNGAG
KSTLFKLLAGKEQPDSGEVIIGSTVKMAFVDQHRDELANNKTVWEDISNGLDIINVGKFQ
MASRAYAGRFNFNGADQQKKVGTLSGGERGRLHLAKTLIAGGNVLLLDEPSNDLDVETLR
ALEDALLEFAGTVMVISHDRWFLDRIATHILAAEGDSQWTFFDGNYQEYEADKKKRLGEE
GAKPKRMRYKALK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatacgtctattcgatgaaccgcgtcagcaagaccgtgccgcccaagcggcag
ctcttgaaagacatttcgctctctttcttccccggcgccaagatcggcgtgctcggcctg
aacggctcgggcaagtcgacgctgctcaagatcatggcgggtgtggacaaggagttcgag
ggcgaggcgctgcccatgccggggatgacgatcggctatctggagcaggaacccaagctc
aaccccgagcacacggtgcgcgaatcggtcgaagagtccatgggcgcggtgtttgcggcc
aaggcgcgcctcgaagaggtgtacatcgcctatggcgccgaagacgccgacttcgacgcg
ctggcggccgagcaggcccagctcgaagccatcatcgccaccgccggcaccgattccgaa
catcaactggaaatcgccgccgatgccctgcgcctgccgccgtgggacgcgaagatcggc
ctgctgtcaggcggcgaaaagcggcgcgtggcgctgtgccgcctcttgctgtccaagccc
gacatgctgctgctcgatgagccgaccaaccacctggacgccgaatcggtggagtggctc
gaagtgttcctgcagcgcttcacgggcaccgtggtggccatcacccacgatcgctacttc
ctcgacaacgcggccgagtggatcctggaaatggaccgcggccgcggcattccctggaag
ggcaactacagcacctggctcgagcagaagggcgaacgcctggcgcaggagcagaagagc
gaagaagcccacgccaaggcgctgaagaaggagctcgagtggtcgcgccagaacccgaag
gcacgccaggccaagagcaaatcgcgcctcgcccgcttcgaagagctgagcgacatggaa
taccagaagcgcaacgagacacaggagatcttcattcctgtggcggagcggctgggtcag
caggtgttcgagttccacggcgtcagcaagtccttcggcgaccgcatgctgatcgacaac
ctgagcttcaccgtgccgccgggcgcgatcgtcggcatcatcggcccgaacggcgccggc
aagtcgacgctcttcaagctgctcgcgggcaaggagcagccggacagcggcgaagtcatc
atcggctcgacggtcaagatggccttcgtcgaccagcaccgtgatgagctcgccaacaac
aagaccgtctgggaagacatctcgaacggcctggacatcatcaacgtcggcaagttccag
atggccagccgcgcgtacgcgggtcgcttcaacttcaacggcgcggaccagcaaaagaag
gtcggcacgctctcgggcggcgaacgcggccgcctgcacctggccaagacgctgatcgcg
ggcggcaacgtgctgctgctggacgagccctcgaacgacctggacgtcgaaacgctgcgc
gcgctcgaagacgcgctgctcgaattcgccggcaccgtgatggtcatcagccacgaccgc
tggttcctcgaccgcatcgccacgcacatcctcgcggccgaaggcgacagccagtggacc
ttcttcgacggcaactaccaggagtacgaggccgacaagaagaagcgcctgggcgaagaa
ggcgcaaagccgaaacgcatgcgctacaaggctctcaagtag
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