Variovorax paradoxus B4: VAPA_1c38080
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Entry
VAPA_1c38080 CDS
T02835
Name
(GenBank) putative ABC transporter, ATP-binding protein
KO
K10112
multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c38080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c38080
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Maltose/maltodextrin transporter
VAPA_1c38080
Maltose transporter
VAPA_1c38080
Arabinogalactan oligomer/maltooligosaccharide transport system
VAPA_1c38080
Raffinose/stachyose/melibiose transporter
VAPA_1c38080
Alpha-glucoside transporter
VAPA_1c38080
Glucose/mannose transporter
VAPA_1c38080
Trehalose/maltose transporter
VAPA_1c38080
Cellobiose transporter
VAPA_1c38080
N,N'-Diacetylchitobiose transporter
VAPA_1c38080
L-Arabinose/D-xylose transporter
VAPA_1c38080
Fructooligosaccharide transporter
VAPA_1c38080
Putative sorbitol/mannitol transporter
VAPA_1c38080
Arabinooligosaccharide transporter
VAPA_1c38080
Polygalacturonan/rhamnogalacturonan transporter
VAPA_1c38080
Pectin-derived oligosaccharide transporter
VAPA_1c38080
Putative multiple sugar transporter
VAPA_1c38080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
OB_MalK
TOBE_2
AAA_21
TOBE
SMC_N
RsgA_GTPase
AAA_22
nSTAND1
CysA_C_terminal
AAA_28
AAA_16
nSTAND3
Rad17
AAA_29
AAA_25
AAA_5
MIT_C
AAA_17
AAA
NACHT
AAA_33
AAA_23
AAA_18
ATPase_2
bpMoxR
IstB_IS21
AAA_14
MMR_HSR1
AAA_30
Mg_chelatase
RNA_helicase
NB-ARC
AAA_15
cobW
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
AGU50890
UniProt:
T1XFJ4
LinkDB
All DBs
Position
1:complement(4024359..4025426)
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AA seq
355 aa
AA seq
DB search
MASVSFRNIQKSFGKVQIIQGLSFDITDGEFVVLVGPSGCGKSTLLRMLAGLEDISGGEI
MIDSRVVNDLESKDRDIAMVFQSYALYPHMTVGENMGFSLRLRNAEKSVTDERVARAAKI
LNLDALLGRYPRELSGGQRQRVAMGRAIVRDPKVFLFDEPLSNLDAKLRVAMRAEIKALH
QRLKTTTVYVTHDQIEAMTMADRIVVMHDGIVEQIGTPLDLYDRPDNLFVAQFIGSPSMN
VIEGTVRRSGGECHVEAHGARWPVPPGTSAPDGQPVHYGIRPGDITLGGGSGVDAQVIVV
EPTGAETELLVQVGEAKLVLAVHGRVDAQPDQTVGLAIDANRVHLFDRQSGRRMP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtatcctttcgcaatatccagaaatccttcggcaaggtccagatcatccag
ggcctgagtttcgacatcaccgatggcgagttcgtggtgctggtcgggccttcgggctgc
ggcaagtcgaccttgctgcgcatgctcgcgggcctggaggacatcagcggcggcgagatc
atgatcgacagccgtgtggtcaacgacctcgagtcgaaggatcgcgacatcgccatggtg
ttccagagctacgcgctctatccgcacatgacggtgggcgagaacatgggcttcagcctg
cggctgcgcaatgccgagaagtcggtgaccgacgagcgcgtggcgcgggccgcgaagatc
ctcaacctcgatgcactgctcggacgctatccgcgcgagctgtcgggcgggcagcgccag
cgcgtggccatggggcgcgccatcgtgcgcgacccgaaggtgttcctgttcgacgagccg
ctgtccaacctcgacgccaagctgcgcgtggcaatgcgcgccgagatcaaggcgctgcac
cagcgcctgaagaccaccaccgtctacgtgacgcacgaccagatcgaggccatgaccatg
gccgaccgtatcgtggtgatgcacgacggcatcgtcgagcagatcggcacgccgctcgac
ctgtacgaccgccccgacaacctgttcgtcgcgcagttcatcggctcgccgtcgatgaac
gtgatcgagggcacggtgcggcgttcgggtggcgaatgccacgtcgaggcgcatggcgcg
cgctggcccgtgccgccgggtacctcggcacccgacggccagccggtgcactacggcatc
cgccccggcgacatcacgctgggcggcggcagcggtgtcgatgcgcaggtgatcgtggtc
gagcccacgggcgccgagaccgaactgctggtgcaggtcggcgaagcgaagctggtgctg
gcggtgcatggccgcgtcgacgcgcagcccgaccagaccgtgggcctggcgatcgatgcc
aaccgcgtgcacctgttcgaccgccagagcggccggcgcatgccctga
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