Variovorax paradoxus B4: VAPA_1c38110
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Entry
VAPA_1c38110 CDS
T02835
Name
(GenBank) putative ABC transporter, substrate-binding protein
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c38110
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
VAPA_1c38110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AGU50893
UniProt:
T1XEA6
LinkDB
All DBs
Position
1:complement(4027207..4028592)
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AA seq
461 aa
AA seq
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MKVVKSLIAPTLFALGLLAAAGPAAAQEKLTVWWVKGFYKAEDDALFAAIKKFEDKNKNV
KIELSQYPIQDMIPKTVSALDSGSPPDVAYADVYDFQVTGKWAFDGKLEDLGSVLSPMKD
RFAPNTLETTFLYNDQTKAKAYYAFPIKQQTMHVEYWLDMLTEAGLKEADIPTTWKDYWS
FWCDKVQTASRQKSGKRTFGIGMPMGVDSSDSFYSFLTFMDAYNVKLVDDNGKLLVDDPK
VRTGLIGALTDYTTPYTKGCTPPSSTSWKDPDNNVAFHNKTTLMTHNATISIAAKWLDDS
NNASLTPEQREEARKNYTERIRTAGFPSKPDGSKMVYRTAVKTGVVFKDAKNKARAKEFV
SFLLQEENLTPYVEGSLGRWFPVTKTGQQRDFWKADPHRLSVYNQYAAGTVTFEFTKNYK
FTVLNNENVWAKAMSRVVTDKVPVDKAVDEMIARIKTVAAQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgtcaagtcgctgatagcgccgacgttgttcgcgctggggttgttggcggcg
gcaggtcccgctgccgcgcaggaaaagctcaccgtctggtgggtcaagggcttctacaag
gcggaggacgatgcgctgttcgccgccatcaagaagttcgaggacaagaacaagaacgtg
aagatcgagctgtcgcagtacccgatccaggacatgattcccaagaccgtgtccgcgctc
gactccggcagcccgcccgatgtggcatacgctgacgtgtacgacttccaggtcacgggc
aagtgggccttcgacggcaagctcgaggacctcggcagcgtgctctcgcccatgaaggac
cgcttcgcgccgaacacgctcgagaccaccttcctctacaacgaccagaccaaggccaag
gcctactacgccttcccgatcaagcagcagacgatgcacgtggagtactggctcgacatg
ctcaccgaggccgggctcaaggaagccgacattccaaccacctggaaggactactggtcc
ttctggtgcgataaggtgcaaaccgccagccgccagaaaagcggcaagcgcactttcggc
atcggcatgcccatgggcgtggattcgagcgactccttctattcgttcctgaccttcatg
gacgcctataacgtcaagctggtggacgacaacggcaagttgctggtcgacgacccgaag
gtgcgcaccggcctgatcggcgcgctgaccgactacaccacgccctacaccaagggctgc
acgccaccgtcgtcgacgagctggaaggacccggacaacaacgttgcgttccacaacaag
acgacgctgatgacgcacaacgcgaccatctccatcgccgccaagtggctcgacgactcg
aacaacgcctcgctcacgcccgagcagcgtgaagaggcgcgcaagaactacaccgagcgc
atccgaacggccggcttcccgagcaagcccgacggcagcaagatggtctaccgcacggcc
gtgaagaccggcgtggtgttcaaggacgcgaagaacaaggcacgcgccaaggaattcgtc
tccttcctgctgcaggaagaaaacctcacgccgtacgtcgaaggttcgctgggccgctgg
ttccccgtgaccaagaccgggcagcagcgcgacttctggaaggccgacccgcaccgactc
tcggtctacaaccagtacgccgccggcaccgtgaccttcgagttcaccaagaactacaag
ttcaccgtgctcaacaacgagaacgtctgggccaaggcgatgagccgcgtcgtcaccgac
aaggtgccggtggacaaggcggtcgacgagatgatcgcgcgcatcaagacggtcgcggcg
cagtaa
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