Variovorax paradoxus B4: VAPA_1c38120
Help
Entry
VAPA_1c38120 CDS
T02835
Name
(GenBank) putative transcriptional regulator, GntR family
Organism
vpd
Variovorax paradoxus B4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
MarR_2
HTH_24
HTH_Crp_2
TrmB
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AGU50894
UniProt:
T1XEW7
LinkDB
All DBs
Position
1:complement(4028695..4029438)
Genome browser
AA seq
247 aa
AA seq
DB search
MIKNIHGRTLELLGEAVVAGRYAIGASIPAEPILGEELGVSRTVVREAIKSLAAKGLIVT
GPKVGTRVLPQDKWNWFDPDVITWQSRAGLTPEFLRDLQDLRRVVEPAAVRLAAERASPQ
DIEEIERAFAGMKEAVENGGDYVTFDLRFHTGLLSAARNRMLAQMSKALNALLRTSFEIS
TSKPDGPALSLPLHRAVLDAVIAHDPAKAERAVIRLIDGARQDIEDVLGSRRRLPRLSRP
PPRLKAN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaacatccacggtcgcacgctcgagctgctcggcgaagctgtcgtggccggt
cgttatgcgatcggggcgtcgatcccggccgaacccattctgggcgaggagctcggcgtg
agccgcaccgtggtgcgcgaggccatcaagtcgctcgcggccaagggcctgatcgtgacg
ggccccaaggtgggcacgcgggtgctgccgcaggacaagtggaactggttcgaccccgat
gtcatcacctggcagtcgcgtgccgggctcacgcccgaattcctgcgcgacctgcaggac
ctgcggcgcgtggtcgagccggcggccgtgcgcctcgcggccgaacgggccagcccgcag
gacatcgaggagatagagcgcgccttcgccggcatgaaggaagccgtggagaacggcggc
gactacgtcaccttcgacctgcgctttcacaccggcctgctgagcgcggcgcgcaaccgc
atgctcgcgcagatgagcaaggcactcaacgcgctgcttcgcaccagtttcgaaatctcg
accagcaagcccgacggtcccgcgctttcgctgccgctgcaccgcgcagtgctcgacgcg
gtgatcgcgcacgatccggccaaggccgagcgggcggtcatccgcctcatcgacggcgcg
cggcaggacatcgaagacgtgctcggctcacgccgccgcctgccgcggctcagtcgcccg
ccgccgcggctcaaggcgaactag
DBGET
integrated database retrieval system
