Variovorax paradoxus B4: VAPA_1c38810
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Entry
VAPA_1c38810 CDS
T02835
Name
(GenBank) TonB-dependent siderophor receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c38810
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c38810
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AGU50963
UniProt:
T1XEH6
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All DBs
Position
1:4114513..4116714
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AA seq
733 aa
AA seq
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MLNARLKGAAPAGACPAPGTASLPSFKNSTLGLGTGATLLVLCAAAQSGRAHAQEATDRA
AAALPTVTATAAEETTLQHLGAKVSSGALGARTQLETPFSTTVVKSEDLAERQVSKLGDV
FALDASVSDNSGAYSSWASYITVRGLPLDWQNGYRMDGKPFLSYAITLPYEHFEQIELLK
GSSGFMYGFGSPGGIVNYVPKKPTDQPVRSIDIGYKSSSIWSEHVDLGGRFGADDRFGYR
LNATHEEGKTFNDGGIRRDSVSLALDARLTRDLTWTFDALYQKRKSTDQTPSIVTSGYTG
TRLPATIREDGQKLVGPGQHLATDLQLYSTGLQYKLTPDWTLSTSYSHSTSKRSRNEGIL
YLQDASGSYDDYRSDTREGHRFDQWQAMAEGKLRTGSIEHQLTLGAAWQKQVNDYSSNSI
YQWIGTGSIFGQNTNAYASTTDLALYRNSDITQRAVFASDTMKLSDRWSVLAGLRSTNYE
QRGYGTDGAKTSEYAKKGVVTPTLALMFKPAPDTTLYTSYVESLEQGSSVGNLYANEGEL
LKPLKSKQYELGIKTDRERWSATAALFRIERGAEYANSANVLVRDGQSIYQGLELAASTR
LGSQWQIGGNLMFLDTSYRRGAENIGNRVAGAPNFVATAQVSYAVPQVPGLKLSADAKYT
GSTMLNAANQLKLPGYAVANIGASYATRIHGHDTTFRVAVNNLTNRRYWEYQYDNYIKPG
DPRTFSLSAKLDF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
ttgttgaacgcaagactcaagggcgctgcgccggccggcgcgtgcccggcaccaggaacc
gcctccctcccctccttcaagaactcgacgctcggcctgggcaccggcgccacgctgctg
gtcctgtgcgcagccgcccagagcggccgtgcccatgcccaggaggccacggacagggca
gccgccgcgctgccgaccgtcacagccaccgcagcggaagaaacaacgctccagcatctc
ggcgccaaggtgagcagcggcgccctgggcgcacgcacgcagcttgagacgcccttctcc
accaccgtggtcaagagtgaagacctggcggagcgccaggtgtccaagctgggcgacgtg
ttcgcgctcgatgcctcggtgtccgacaacagcggcgcctacagcagctgggccagctac
atcaccgtgcgcggcctgccgctggactggcagaacggctaccggatggacggcaagccc
ttcctgagctacgccatcacgctgccctacgagcatttcgagcagatcgagctgctcaag
ggatcgtcgggtttcatgtacggcttcggctcgccgggcggcatcgtgaactacgtgccc
aagaagccgaccgatcagcccgtgaggagcatcgacatcggctacaagtccagcagcatc
tggagcgagcacgtcgacctgggcgggcgtttcggcgccgacgaccgcttcggctaccgg
ctcaatgccacgcacgaagaaggcaagaccttcaacgacggcggcatccgccgcgattcg
gtgtcgctggcgctcgacgccaggctgacacgcgacctgacctggaccttcgacgcgctc
taccagaagcgcaagtccacggaccagacgccgtcgatcgtcaccagcggctataccggc
acgcgcctgcccgccacgatccgcgaggacggccagaaactcgtgggccccgggcagcac
ctcgccacggatctgcagctctactcgacaggcctgcagtacaagctgacgcccgactgg
acgctgagcaccagctacagccacagcacctccaagcgcagccgcaacgaaggcattctt
tacctgcaggatgcgagcggcagctacgacgactaccgctccgacacccgcgagggccat
cgtttcgaccagtggcaggccatggccgagggcaagctgcgcaccggcagcatcgagcac
cagttgacgctgggcgcagcgtggcagaagcaggtcaacgactacagcagcaacagcatc
taccagtggatcggcaccggcagcatcttcgggcagaacaccaacgcctacgccagcacg
accgacctcgcgctctatcgcaacagcgacatcacgcagcgcgcggtcttcgcgagcgac
accatgaagctgtcggaccgctggtcggtgctggccggcctgcgcagcaccaactacgaa
cagcggggctatggcaccgacggagccaagacctcggagtacgccaagaaaggcgtggtg
acgccgacgctggcgctgatgttcaagcccgcgcccgacaccacgctctacacgagctat
gtcgaatcgctcgagcagggcagctcggtcggcaacctctacgcgaacgaaggcgaactg
ctcaagccgctcaagagcaagcagtacgagctgggcatcaagaccgaccgcgagcgctgg
agcgcgacggccgcgctgttccgcatcgagcgcggcgccgaatacgccaacagcgccaac
gtgctggtgcgggacggccagtcgatctaccagggcctggaactggccgcgtccacgcgc
ctgggatcgcagtggcagatcggcggcaacctgatgttcctcgacacctcgtaccggcgc
ggcgccgagaacatcggcaaccgcgtggcgggcgcgccgaacttcgtggccacggcgcag
gtgtcgtatgcggtgccgcaggtgccgggcctgaaactctcggccgatgcaaagtacacg
ggcagcaccatgctcaatgcggcgaaccagctgaagcttcccggctatgccgttgccaac
atcggcgcaagctacgccacgcgcatccacgggcacgacacgaccttccgcgtggcggtg
aacaacctgacgaacaggcgctactgggaataccagtacgacaactacatcaagcccggc
gacccgcgcaccttcagcctgagcgccaagctggacttctag
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