Variovorax paradoxus B4: VAPA_1c39080
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Entry
VAPA_1c39080 CDS
T02835
Name
(GenBank) putative D-methionine-binding lipoprotein, NlpA family
KO
K02073
D-methionine transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c39080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c39080
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
D-Methionine transporter
VAPA_1c39080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lipoprotein_9
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AGU50987
UniProt:
T1XDF9
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All DBs
Position
1:complement(4137659..4138480)
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AA seq
273 aa
AA seq
DB search
MKTALLRRSVLALSLAALSFGGLSLAQAQEAKKNLVIGGTAGSNIDQLKVGIVPILEKKG
YKVKLVEFNDYVQPNLALAQGSLDANFFQHQVYLKKFSADQKLDLAELVQGPIAPLGVYS
TKRKTLAEVKEGDRFTLPNDPSNLARALVLLEQNKLITIKPGVDALRASEKDVAENPKKL
KFIPLEAAQLPRSLGDTEYAIVNGNFAISSGLKLNEAVVLEKTPDYYLNVVAVKSADRNA
PWAKDIAEAYRSKEFKAVVDSKFQGYAKPSFLQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgcactgctgcgccgctccgtccttgccctgtccctggctgccctgtcgttc
ggcggcctttcgctggcacaggcccaggaagccaagaagaacctcgtgatcggcggtacc
gccggctccaacatcgaccagctcaaggtcggcatcgtgcccatcctcgagaaaaagggc
tacaaggtgaagctggtcgagttcaacgactacgtgcagcccaacctcgcgctcgcgcaa
ggctcgctcgatgccaacttcttccagcaccaggtctacctgaagaagttctcggccgac
cagaagctcgacctcgccgagctggtgcagggccccattgcgccgctgggcgtgtactcc
accaagcgcaagacgctggccgaggtgaaagagggcgaccgcttcacgctgcccaacgac
ccgagcaacctggcccgtgccttggtgctgctggagcagaacaagctcatcaccatcaag
cccggtgtcgatgcgctgcgcgcgtccgagaaggacgtggccgagaacccgaagaagctc
aagttcattccgctcgaggccgcacagctgccgcgctcgctgggcgacaccgagtacgcc
atcgtcaacggcaacttcgcgatctcgtcgggcctgaagctcaacgaagccgtggtgctc
gagaagacgcccgactactatctgaacgtggtggccgtgaagagcgcggacaggaacgcg
ccctgggccaaggacattgccgaggcctaccgctcgaaggaattcaaggccgtggtcgac
agcaagttccagggctacgccaagcccagcttcctgcagtaa
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