Variovorax paradoxus B4: VAPA_1c39220
Help
Entry
VAPA_1c39220 CDS
T02835
Name
(GenBank) putative xanthine dehydrogenase FAD-binding subunit YagS
KO
K11178
xanthine dehydrogenase YagS FAD-binding subunit [EC:
1.17.1.4
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00230
Purine metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01232
Nucleotide metabolism
Module
vpd_M00958
Adenine ribonucleotide degradation, AMP => Urate
vpd_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VAPA_1c39220
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
VAPA_1c39220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_5
CO_deh_flav_C
Motif
Other DBs
NCBI-ProteinID:
AGU51000
UniProt:
T1XFV9
LinkDB
All DBs
Position
1:4153759..4154751
Genome browser
AA seq
330 aa
AA seq
DB search
MKPFAFTRATDVDTAIRAATQPGARFLAGGTNIVDLMKEGVEAPDQLVDINRLPLAAVEA
RPAGGLRLGALARNSDTANHPVLRTRYPLVAQAILAGASGQLRNAATNAATCASARAAPT
SIDVTQPCNKREPGTGCSALQGFNRNHAVLGTSAKCIASYPGDMAQALHALDAVVQLQGP
AGRRTIPIAQFHRLPGETPELDANLAPGELITAIDLPAESARFAQRSHYLKVRDRASYAF
ALVSVAAALDMEGRRIRQARICLGGVAHMPWRAREAEALLQGAEPNMALFRQAAEAALAG
ATGFEHNRFKIELARRSIVRALETTSRSTT
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccttcgcattcacccgcgccacggatgtggacacggccattcgtgcggccacg
cagccgggggcaagattcctggccggcggcaccaacatcgtcgacctgatgaaggaaggc
gtggaagcgcccgaccagctggtggacatcaaccgcctgccgctggcggccgtcgaggcg
cggcccgcgggcgggcttcggctgggcgcgctggcgcgcaacagcgacacggccaaccac
cccgtgctgcgcacgcgctatccgctggtggcgcaggccattcttgcgggcgcctcgggc
cagttgcgcaacgccgccaccaacgcggcaacctgcgccagcgcacgcgctgcccctact
tctattgacgtgacccagccctgcaacaagcgcgagccgggcacgggctgcagcgcgctg
cagggcttcaaccgcaaccacgcggtgctgggcaccagcgcgaagtgcatcgcgagctac
ccgggcgacatggcgcaggcgctgcatgcgctcgatgcggtggtgcagctgcaggggccc
gcgggccgcaggaccattccgattgcgcagttccaccgcctgccaggcgagacgcccgaa
ctcgatgccaaccttgcgccgggcgagctgatcaccgccatcgacctgccggccgagagc
gcccgcttcgcgcagcgctcgcattacttgaaggtgcgcgaccgtgccagctatgccttt
gcgctggtgtcggtggcggccgcgctcgacatggagggccgccgcatccggcaggcgcgc
atctgcctgggcggcgtggcgcacatgccctggcgcgcgcgcgaggccgaggcgctgctg
caaggcgccgagcccaacatggcgttgttccggcaggcggcggaggccgcgctggccggc
gccacgggcttcgagcacaaccgcttcaagatcgaactggccaggcgaagcatcgtgcgc
gcgctggaaaccacgagcaggagcacgacatga
DBGET
integrated database retrieval system
