Variovorax paradoxus B4: VAPA_1c39230
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Entry
VAPA_1c39230 CDS
T02835
Name
(GenBank) putative xanthine dehydrogenase molybdenum-binding subunit YagR
KO
K11177
xanthine dehydrogenase YagR molybdenum-binding subunit [EC:
1.17.1.4
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00230
Purine metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01232
Nucleotide metabolism
Module
vpd_M00958
Adenine ribonucleotide degradation, AMP => Urate
vpd_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VAPA_1c39230
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
VAPA_1c39230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
AGU51001
UniProt:
T1XEQ6
LinkDB
All DBs
Position
1:4154748..4156925
Genome browser
AA seq
725 aa
AA seq
DB search
MNRQATPLIGQPVDRVDGRLKVTGQARYAAEFSYPGLVYGVALGSTVAAGRVRDIDTAAA
EQSPGVLLVLTHKNVPKMPPPAPETPQNRFTRATPLLQDTAIHHHGQLIGFVVAETLEQA
RHAATLVKVSYDAAQPRIGFDANVRNAYAPAAINAGYKTDTRRGDLDQGLRAAAGTVDAV
YNTPIEHHHPMEMHATVAAWEGDDKVTVHHSLQMVSDAAPAIAATFDIPRENVRVVCPFV
GGGFGSKILTRDNAMLAVLAARLVKRPVKHVLTRQQMFMVVGLRQHNRQHMRLGADASGR
LTGLGHDTVTHTSVHEEFVEQTGVISRMMYEVPNSQVTHRAFRLNVQTPKWTRAPGEAPG
SFALESAMDELAEQLKIDPVELRIRNDARTDLDTGKPFGSRSLVECMRIGAEKFGWSNRS
AMPRSRRQGHWLVGYGMSAASRGAPHRGASANLLLTRNGRDVRAVVEMCATDLGTGSYTV
IAQTAAETLGLPLDKVEVRLGDSALPPTPGSGGSWGANTFCTAALAVCEAARQQLREKVN
LRFVREPSVAELLQAAQLNEWRASNTATPGADIAAWSHYAFGANFAEVWVDEDLGLVRVP
RYMAVIAAGRILNPKTAASQIIGGIVWGIGNALMEESVLDERSGHFVTRTLADYHVPVNA
DIGDVQVLFAPETDTRVNRMGVKGVGEIGITSVAAAIANAVYNATGRRVRDLPITPDKLL
TPIQA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaacagacaagctactcccctcatcgggcagccggtcgaccgcgtggacggccgcctc
aaggtgaccggccaggcgcgctatgcggccgagttttcgtacccagggctggtgtacggc
gttgcgctgggcagcaccgttgcggccgggcgcgtgcgcgacatcgacaccgcggcggcg
gagcaatcgcccggcgtgctgctggtgctcacgcacaagaacgtgcccaagatgccgccg
cccgcgcccgagaccccgcagaaccgcttcacgcgcgccacgccgctgctgcaggacacg
gccattcaccaccacggccagctcatcggcttcgtggtggccgagacgctcgagcaggcg
cgccatgcggccacgctggtgaaggtgagctacgacgcggcccagccccgcatcggcttc
gacgccaacgtccgcaacgcctatgcgccggcggccatcaacgccggctacaagaccgac
acgcggcgcggcgatctcgaccagggcctgcgcgccgcggcgggcacggtcgatgcggtc
tacaacacgcccatcgagcaccaccacccgatggagatgcacgccaccgtggccgcgtgg
gagggcgacgacaaggtcacggtgcaccactcgctgcagatggtgagcgatgccgccccg
gccattgccgccaccttcgacattccgcgcgagaacgtgcgcgtggtgtgcccgttcgtg
ggcggcggcttcggcagcaagatcctcacgcgcgacaacgcgatgctggcggtgctggcc
gcgcgcctcgtgaagcggccggtcaagcacgtgctcacgcggcagcagatgttcatggtg
gtcggactgcgccagcacaaccgccagcacatgcggctgggcgcggatgccagcggccgg
ctcacggggctgggccacgacaccgtcacccacacctcggtgcacgaggagttcgtcgag
cagaccggcgtcatctcgcgaatgatgtacgaggtgccgaactcgcaggtcacccaccgc
gcctttcgcctcaacgtgcaaacgccgaagtggacccgcgcaccgggcgaggcgcccggc
agctttgcgctcgaatcggccatggacgaactcgccgagcagctgaagatcgacccggtg
gagctgcgcataaggaacgacgccaggaccgacctcgacacgggcaagcccttcggcagc
cgctcgctcgtcgaatgcatgcgcatcggcgccgagaaattcggctggagcaaccgcagc
gccatgccgcgcagccgcaggcagggccactggctcgtgggctacggcatgagcgcggca
tcgcgcggcgcaccgcaccgcggcgcctcggccaatcttttgctcacgcgcaatggccgc
gacgtgcgcgcggtggtggagatgtgcgcaaccgatctcggcaccggcagctacaccgtc
attgcgcagaccgccgccgagacgctgggcctgccgctcgacaaggtcgaggtgcggctc
ggcgattcggcccttccgcccacgcccggttcgggcggctcctggggcgccaacaccttc
tgcaccgcggcgctcgcagtctgcgaagcggccaggcagcagctgcgcgagaaggtcaac
ctgcgcttcgtgcgcgaacccagtgtggcggagctgctgcaggcggcccagctgaacgaa
tggcgcgccagcaatacggccacgccgggcgcggacatcgccgcctggtcgcactacgcc
ttcggtgccaactttgccgaagtgtgggtcgacgaagacctggggctggtgcgcgtgccg
cgctacatggcggtgattgcggccgggcgcatcctcaaccccaagaccgcggcgtcgcag
atcatcggcggcatcgtctggggcattggcaacgcgttgatggaagagtcggtgctcgac
gagcgcagcggccacttcgtcacgcgcacgctggccgactaccacgtgcccgtgaacgcg
gacatcggcgacgtgcaggtgctcttcgcgcccgaaaccgacacccgggtcaaccgcatg
ggcgtgaagggcgtgggcgagatcggcatcaccagcgtggccgccgccattgccaacgcg
gtctacaacgccacaggacgccgcgtgcgcgacctgcccatcacgcccgacaaattgctg
accccgatccaggcatga
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