Variovorax paradoxus B4: VAPA_1c39410
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Entry
VAPA_1c39410 CDS
T02835
Name
(GenBank) transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c39410
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
IclR family
VAPA_1c39410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_PafC
HTH_5
MarR
HTH_Tnp_4
DUF3151
HTH_Crp_2
HTH_24
TrmB
JetA
Motif
Other DBs
NCBI-ProteinID:
AGU51019
UniProt:
T1XFA6
LinkDB
All DBs
Position
1:4179209..4180018
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AA seq
269 aa
AA seq
DB search
MDSTLAKGLAAIEWMTRQQRDCRVTDLAQAFGMARSNAHRTLQTLVECGWAVQDPDTSAY
RPSLRLFELGALVSEATDMGSLLRPHLAALAQQTGETIHLAVLDGAEIVYLDKFDSPLPV
AAYSRIGGRAAAYCVASGKALLAAAAPDLSALHERLGTLAAHTKNSITSFDALLSELERT
RVRGYAENREEWRLGVCGLGVPVFNARGEAIAAVGMSVPSIRFARTQARGLADRLMACAR
DASVTLGYRASPVPAAPLPTSTTRRRRLG
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggattccaccctcgccaagggccttgccgccatcgaatggatgacgcggcaacagcgc
gactgccgcgtcaccgacctggcccaggccttcggcatggcgcgcagcaatgcgcaccgc
acgctgcagacgctggtcgaatgcggctgggccgtgcaggacccggacaccagcgcctac
cgcccgagcctgcgcctgttcgagctcggcgcgctggtttccgaggccaccgacatgggt
tcgctgctgcggccgcacctcgcggcactggcgcagcagaccggcgagaccatccacctt
gcagtgctcgacggcgccgagatcgtctacctcgacaagttcgacagccccctgcccgtg
gctgcctattcgcgcatcggcggccgggcggccgcgtattgcgtggcctcgggcaaggcc
ctgctcgccgcggccgcgccggacctttccgcgctgcacgagcgcctcggcacgctcgcg
gcgcacacgaagaacagcatcaccagcttcgatgcccttctctcggaactcgaacgcacg
cgcgttcgcggctatgcggaaaaccgcgaggaatggcgcctcggcgtctgcggtctcggc
gtgccggtgttcaacgcgcgcggcgaagcgatcgcggccgtcggcatgagcgtgccctcg
atccgcttcgcgcggacgcaggcgcgcgggctggccgaccgcctcatggcctgcgcgcgc
gacgcgagcgtcacgctgggctaccgggcaagcccggtgccggcggcgccgctgccgaca
tccaccacaaggagaaggagactcggatga
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