Variovorax paradoxus B4: VAPA_1c39770
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Entry
VAPA_1c39770 CDS
T02835
Name
(GenBank) putative aminotransferase domain containing transcriptional regulator, GntR family
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c39770
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
VAPA_1c39770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
HTH_Crp_2
HTH_24
HTH_41
HTH_IclR
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AGU51055
UniProt:
T1XG16
LinkDB
All DBs
Position
1:4219811..4221289
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AA seq
492 aa
AA seq
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MSPPPRNAAATAWLESPLAREREAGPMQRQLHERLKRAILDSGLAPGSRLPGSRALAEAL
SISRNTVTAAYEHLAAEGYVQPDRQGTRVTELAPPAKAMRAIKSGAAPATARRLARIQPG
APRAEMDAALRPGMPALSHFPGAAWRRAVDRAIRGASPATLGYGDPLGEPPLRAAIARHL
AIARGVRCEPHQVVIAEGAQEAIALCVRLLSNPGDTGWVEDPGYRGAKAAMHAGDMRIVP
MRVDAEGLCVSERDWHRHPPRLVYTTPSHQYPAGAVLSITRRLALIAQARRHGAWIIEDD
YDSEFRHTGEPIGAMQGLVDDAPVLYVGTFSKTMFPSLRLGFVVLPAPLMATVQKPLEEM
LRGGHRHEQLAMADFIESGQFSRHLGRMRRLYRERQQALRAALARHFKVPHEIDGGHCGL
HLTVRLPPRFDDQRIAADALRHRLAPTALSNFAIRPGPSDNGLVLGYGNTSAELFEPLVK
RLSQLARAAERA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcccaccgccccgcaacgccgccgccaccgcgtggctcgaatccccgcttgccagg
gagcgcgaggccggcccgatgcagcgccagctgcacgagcgcctgaagcgcgccattctc
gatagcggccttgcgccgggcagccggctgcccggttcgcgcgcgctggccgaggccctc
tcgatttcccgcaacaccgtcaccgcggcctacgagcacctggcggccgaaggctatgtg
caacccgaccggcagggcacgcgcgtgaccgagctggcaccgcccgcaaaggccatgcgc
gccatcaagtccggcgctgcgccggccactgcgcggcggctcgcacgcatccagcccggc
gcgccgcgcgccgagatggacgccgccctgcggcccggcatgcccgcgctctcgcacttt
cccggggccgcatggcggcgcgccgtcgaccgtgcgatccgcggcgccagccccgccacg
ctcggctatggcgatccgctcggcgaaccaccgctgcgcgcggccatcgcgcggcacctg
gccattgcgcgcggcgtgcgctgcgagccgcaccaggtcgtgattgccgagggcgcgcag
gaagccattgcgctgtgcgtgcggctgctgtccaaccccggcgacaccggctgggtcgaa
gacccgggctaccgcggcgcgaaggcggccatgcatgccggcgacatgcgcatcgtgccg
atgcgcgtcgatgccgaaggcctgtgcgtgagcgaacgcgactggcacaggcacccgccg
cggctggtctacaccacgccctcgcaccagtacccggccggtgcggtgttgagcattacg
cgccgcctggcgctgatcgcgcaggcgcgccgccatggcgcgtggatcatcgaggacgac
tacgacagcgagttccgccacaccggcgaacccatcggcgcgatgcagggcctggtggac
gatgcgccggtgctctatgtgggcaccttcagcaagaccatgtttccgtcgctgcggctg
ggcttcgtggtgctgcccgcgccgctcatggccacggtgcagaagccgctcgaggaaatg
ctgcgcggcgggcaccgccacgagcagctcgcgatggctgacttcatcgagagcggccag
ttcagccggcacctgggccgcatgcggcgcctctaccgcgagcggcaacaggcgctgcgg
gcggcgctcgcacggcacttcaaggtgccgcacgagatcgacggcggccactgcggactg
cacctcacggtgcggctgccgccgcgcttcgacgaccagcgcatcgccgccgatgcgctg
cgccaccggctcgcgccgaccgcgctgtcgaactttgcgatccgaccggggccttcggac
aacggattggtgctgggctatggcaatacatcggcggaactcttcgagccgctggtcaaa
agactgtcgcagctggcgcgtgcggcggaacgcgcttga
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