KEGG   Variovorax paradoxus B4: VAPA_1c39780
Entry
VAPA_1c39780      CDS       T02835                                 
Name
(GenBank) type VI secretion system, Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VAPA_1c39780
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c39780
Secretion system [BR:vpd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VAPA_1c39780
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Phage_Mu_Gp45
Other DBs
NCBI-ProteinID: AGU51056
UniProt: T1XEW6
LinkDB
Position
1:4221628..4224009
AA seq 793 aa
MKRRVTIQTPLGEALQFHRLVGREALSQAYVFDVDLLSRSNAIDSAAVLGKPATVVMETE
SGSPRYLAGLVTRFGLSHEDDRQAFYKMRLRPWLWLATRRSDFRVFQDQTVPEIVAAVLG
RYGHPLEQKLSRSYRTWTYCVQYHESDFDFISRLCEHEGIYFWFRHEAEQHVLVFADDIA
SSHAPLPGGETVRYHPHEKAGMTGGLEASERIYEWASSEEVRPGHYLNDDYDFEKPRADL
TSLRQMPPGHDHDGFERCEWPGGFTQHDDGETYARIRTEEQLSERSRVTGRANRRDLAPG
CTFTLTRHPREDQNKEHLLLAVDYDLQENLQASEGVAGSEGSVQRFAFEAQPTSYAWRPP
RTTAKPWTEGPQTALVVGPAGEEIWTDRYGRIKVQFHWDRLGQRNENSSCWVRVSTAWAG
ATFGATALPRIGQEVIVDFLNGDPDHPIVTGRVHNADEMPAWQLPQQKHLSGLRSRELGG
GKSNHLALDDSSGKVQAQLKSDHQSTSLSLGHVGRIDDVSGRRDDRGQGAELRTDGHGAL
RAGQGLLLSTEARPNAQGHITDMPETVARLTEGRDLHESLSQAAQAAKAHEAGDQDEVAK
ALKAQNDAIKGSGGDKAHGLFPEFQEPHLTLASPAGIQTTTAGSTHIVSGEHTAITSGAH
TSVATGNSFLVSAKNAVRLSAARAGIRMTAAKDDIDITAMKASINALAKLNIKMEANRIT
ITARDEVLINGGSSYTRWNANGIESGTNGVWRAHAASHSLMGPASLPVKPHSESDCKLRE
GGASNEGAGSLAR
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgaagcgccgcgtcaccatccagacgccgctgggcgaggcactgcagttccatcggctg
gtcgggcgagaggcgctcagccaggcttatgtcttcgatgtcgatctgttgagccgcagc
aatgccatcgactccgcggccgttctcggcaaacccgccaccgtcgtgatggagaccgag
agcggcagcccgcgctacctcgccggcctcgtcacccgcttcggcctgtcgcacgaagac
gaccgccaggccttctacaagatgcggcttcgcccgtggctctggctcgccacgcgccga
agcgatttcagggtgtttcaggaccagaccgtgcccgagatcgttgcggccgtgctgggc
cgttacggccatccccttgagcagaagctcagccgcagctaccgcacgtggacctactgc
gtgcagtaccacgagagcgacttcgacttcatctcgcgcctgtgcgagcacgaaggcatc
tacttctggttcaggcacgaggccgagcagcatgtgctggtcttcgccgacgacatcgcc
agctcgcacgcccccttgcccggcggcgagaccgtgcgctaccacccgcacgagaaggcc
ggcatgaccggcgggctggaggccagcgagcgcatctacgaatgggcgtcctcggaggaa
gtgcgcccaggccattacctcaacgacgactacgacttcgagaagccaagggccgacctc
acgagcctgcggcaaatgccgcccgggcatgaccacgacggcttcgagcgctgcgaatgg
ccgggtggcttcacccagcatgacgacggcgagacctacgcgcgcatccgcactgaagaa
cagctgagcgaacgcagccgggtcacgggccgcgccaaccggcgcgatctggcgccgggt
tgcaccttcacgctcacgcgtcacccccgtgaagatcagaacaaggagcacctgctgctg
gccgtggactacgaccttcaggagaacctgcaggccagcgaaggggtggccgggtccgag
ggctcggtgcagcgcttcgccttcgaggcccaacccacgagctatgcctggcgtcctccg
cgcaccacggccaagccgtggaccgaggggccgcaaacagcgttggtggtcggcccggcc
ggcgaggagatctggaccgacaggtacggacgcatcaaggtccagttccactgggaccgc
ctgggccagcgcaacgagaattcgagctgctgggtgcgtgtgtccaccgcctgggccggt
gccaccttcggcgcgaccgcgctgccgcgcatcgggcaggaggtgatcgtcgatttcctg
aacggcgaccccgaccaccccatcgtcaccggccgggtgcacaacgccgacgagatgccc
gcctggcagctgccgcagcagaagcacctgtcaggcctgcgcagccgcgagctcggtggc
ggcaaaagcaaccacctggctctcgacgattcgagcggcaaggtgcaggcccagctcaag
agcgaccaccagagcaccagcctgagcctgggccacgtcgggcgcatcgacgatgtctcc
ggccgccgggacgaccggggccagggggccgagctgcgcaccgatggccatggcgccctg
cgggccggccagggcctgctgctgagcaccgaggcgcgccccaacgcccagggccacatc
accgacatgcccgagaccgtcgcccggctcaccgagggacgcgatctgcacgaaagcctg
agccaggccgcgcaggcagccaaggcgcacgaggccggcgaccaggacgaggtggccaag
gcgctgaaggcgcagaacgacgccatcaagggcagtggcggagacaaggcgcacggcctc
ttccccgaattccaggagccgcacctgacgctggccagccctgcgggcatccagaccacc
acggccggcagcacccacatcgtgagcggcgagcacaccgccatcaccagcggcgcgcac
accagcgtggccacgggcaacagcttcctggtgagcgccaagaatgcggtgcgcctgtcc
gcggccagggccggcatccgcatgaccgccgcgaaggacgacatcgacatcacggccatg
aaggccagcatcaatgcgctggccaagctcaacatcaagatggaggccaaccgcatcacc
atcacggccagggacgaggtgctgatcaacggcggctccagctacacacggtggaatgcg
aatggcatcgagagcggcaccaatggggtgtggcgggcgcatgcggcaagtcacagtctc
atggggccggccagcctgccggtcaagccgcacagcgagtcggactgcaagctcagggaa
ggcggcgcatccaacgaaggtgccggctccttggctcgctaa

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