Variovorax paradoxus B4: VAPA_1c39820
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Entry
VAPA_1c39820 CDS
T02835
Name
(GenBank) putative aliphatic sulfonates ABC transporter, aliphaticic sulfonates-binding protein
KO
K15553
sulfonate transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00920
Sulfur metabolism
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
VAPA_1c39820
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c39820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c39820
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Sulfonate transporter
VAPA_1c39820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMT1_2
NMT1
Phosphonate-bd
OpuAC
NMT1_3
Motif
Other DBs
NCBI-ProteinID:
AGU51060
UniProt:
T1XG21
LinkDB
All DBs
Position
1:complement(4228992..4229957)
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AA seq
321 aa
AA seq
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MNPHHNRSRRQLLASGLAAAVALPAFSLQARAQGCPVLKAGDQKGGLRALLEAAGGLEGL
GYDIQWSEFPAAAPLAEALNAAAVDSGPIGDAPLIFALAAGTRVKAIGANRSDSYGTAVL
VRPDSPLKTAADLKGRSIATNRGSIAHYVTLKAITAAGLKPEEVNIRFLAPADAKLALTQ
GSVDAWATWEPYTALAEVSRHARVLVSGRGLLPGLSYLAAADAAIAAKRPVLQDFLQRVV
KAQLWSYRNVDAYSAALARIIGIPPEAAKLQFERRQQKWIPIDAQVIADQQGTADFYRQV
GLIKQPLDVKGTFDTGFGVAG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaacccacaccacaaccgatcacgccggcagctgctcgcaagcggcctcgccgctgcc
gtggccctgcccgccttctcattgcaggcccgcgcacagggctgcccagtcctgaaggcc
ggcgaccagaagggcggactgcgcgcgctgctcgaagcggcaggcggactcgaaggcctg
ggctacgacatccagtggtccgaattccccgcagccgcgccgctggccgaagcgctgaat
gccgcggcggtcgattccggccccatcggcgatgcgccgctcatctttgcgcttgcggcc
ggcacgcgcgtcaaggccatcggcgcgaaccgttcggattcgtacggcacggccgtgctg
gtgcggcccgactcgccgctcaagaccgcggccgatctcaagggcaggagcatcgccacc
aaccgcggctccatcgcccactacgtgacgctcaaggccatcaccgcggcgggcctcaag
cccgaggaggtcaacatccgcttcctagcgcccgccgatgccaagctcgcgctcacgcag
ggctcggtcgatgcgtgggccacctgggagccctacaccgcgctggccgaggtcagccgc
catgcgcgcgtgctcgtgagcgggcgcgggctgctgccggggctcagctacctcgcggcc
gccgatgccgccattgccgccaagcggccggtgctgcaggactttctgcaacgcgtggtg
aaggcccagctctggtcgtaccgcaacgtcgatgcctactcggccgcactggcccgcatc
atcggcattccgcccgaggcggccaagctgcagttcgagcgccgccagcagaagtggata
cccatcgatgcgcaggtcatcgccgaccaacagggcacggcggatttctaccgacaggtg
gggctcatcaagcagccgctggatgtgaaggggacgttcgacacggggtttggtgtggcg
ggctga
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