Variovorax paradoxus B4: VAPA_1c40020
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Entry
VAPA_1c40020 CDS
T02835
Name
(GenBank) putative basic membrane lipoprotein
KO
K07335
basic membrane protein A and related proteins
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c40020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c40020
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
VAPA_1c40020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bmp
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AGU51080
UniProt:
T1XG62
LinkDB
All DBs
Position
1:complement(4249173..4250207)
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AA seq
344 aa
AA seq
DB search
MYKNLAGRAVLAWTAACFLSPSFAQPQAPKEPLKIGFVYVTPVTDAGWVRQHEEGRKAVD
AALGGKVKTTFVENVPEGADAERVIRDLAQQGNRLIFTPSFGYMEPTLKVAHDFPDVKFE
SITGYKTAPNVATANARYYEGRYLAGIAAGRMTKTNLAGYVAGFPIPEVLQGINAFALGM
RSVNPNAKVAVVWLNEWFDPPKERDAAMALFNQNADVIAFHTGSTAVMAAAQERGKLAVA
YHSDMRKIAPDAQIVAVTHQWGGYYAQRAQAVLDGSWKSGNVWGGVKEGMIRVGDFGSKV
PKAVQQEVLARQKDIAEGRLQPFRAVGPRCATTKAAPSSPRVRS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaaacctcgcgggccgcgccgttctggcgtggacagccgcctgttttctatct
ccctcctttgcgcaaccgcaggctccgaaagagccgctgaagatcggcttcgtctacgtg
acgccggtcaccgatgccggctgggtgcgccagcatgaagagggccgcaaggccgtcgat
gcggcgctcggcggcaaggtcaagaccaccttcgtcgagaacgttcccgagggcgccgac
gccgagcgcgtgatccgtgacctcgcacagcagggcaaccggctgatcttcacgcccagt
ttcggctacatggagccgacgctcaaggtggcgcacgatttccccgacgtgaagttcgaa
tcgatcaccggctacaagaccgcgcccaacgtcgccaccgccaatgcgcgctactacgaa
ggccgctacctcgcgggcatcgcagccggccgcatgacgaagacgaatctcgcgggctac
gtcgcgggctttccgattccggaggtgctgcagggcatcaacgcctttgcgctcggcatg
cgctcggtgaacccgaatgcgaaggtggccgtggtgtggctcaacgagtggttcgatccg
cccaaggagcgcgatgctgcgatggcgctgttcaaccagaacgccgatgtcatcgccttc
cacaccggctccaccgccgtgatggccgcggcgcaggagcgcggcaagctggccgtggcc
taccactccgacatgcgcaagatcgcgcccgacgcgcagatcgtcgccgtcacgcaccag
tggggcggctactacgcgcagcgtgcgcaggcggtgctcgacggaagctggaagagcggc
aatgtgtggggcggcgtgaaagaaggaatgatccgcgtcggcgacttcggcagcaaggtg
cccaaggccgtacagcaggaggtgctggcgcggcagaaggacatcgcggagggcaggctg
cagccgttccgcgcggtggggccgaggtgcgcgacaacgaaggccgcaccgtcatcgcca
agggtgcgcagctga
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