Variovorax paradoxus B4: VAPA_1c41100
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Entry
VAPA_1c41100 CDS
T02835
Name
(GenBank) putative aspartyl/asparaginyl beta-hydroxylase
KO
K12979
beta-hydroxylase [EC:1.14.11.-]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VAPA_1c41100
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpd01005
]
VAPA_1c41100
Lipopolysaccharide biosynthesis proteins [BR:
vpd01005
]
Lipid A
VAPA_1c41100
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp_Arg_Hydrox
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AGU51187
UniProt:
T1XE37
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All DBs
Position
1:complement(4376283..4377179)
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AA seq
298 aa
AA seq
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MKWVILAIFALSALYVHFRGQVRHRFFRQLSDHSTFLAPLNAFMYIFSKVPSTPYLSPAQ
FPEMRVLEENWQVIREEALAMRNGGSIKASSQFNDVGFNSFFKSGWKRFYLKWYDEAHPS
AAVLCPRTTELLKGIGTIKAAMFAELPPGSRLVRHRDPFAGSLRYHLGLWTPGVEGCYID
VDGQRYHWRDGEAVVFDETYIHYAENTTDHDRVILFCDIERPLKYRWASAVNRWFAKNLL
AAASSPNEAGDKTGGINRAFKYIYQIRVIGKRLKAWDKRVYYLVKWSIFGGLALWIFW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgggtcattcttgccatcttcgcgctcagcgcgctctacgttcatttccgcggc
caggtccggcatcgtttcttcagacagctgtctgatcactcgaccttcctggcgccgctg
aacgccttcatgtacatcttctcgaaggtgccgagcacgccgtacctgtcgcccgcgcag
ttccccgagatgcgcgtgctcgaggagaactggcaggtcatccgcgaagaggcgctcgcc
atgcgcaacggcggcagcatcaaggcctcgagccagttcaacgacgtgggcttcaactcc
ttcttcaagagcggctggaagcgcttctacctgaagtggtatgacgaggcgcatccgtcg
gcggccgtgctttgcccgcgcaccaccgaattgctcaagggcatcggcaccatcaaggcg
gcgatgttcgccgagctgccgccaggcagccgcctcgtgcgccaccgcgatcccttcgcc
ggttcgttgcgctaccacctgggcctgtggacaccgggcgtcgagggctgctacatcgac
gtggacggccagcgctaccactggcgcgacggcgaggccgtggtgttcgatgaaacctac
atccactacgccgagaacacgaccgaccacgaccgcgtgatcctgttctgcgacatcgag
cgtccgctgaagtaccgctgggccagcgccgtgaaccgctggttcgccaagaacctgctc
gctgccgccagttcgcccaacgaggccggcgacaagacgggcggcatcaaccgcgcgttc
aagtacatctaccagatccgcgtgatcggcaagcggctcaaggcctgggacaagcgggtg
tactacctcgtgaaatggtcgatcttcggcggcctggcgctctggatcttctggtag
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