Variovorax paradoxus B4: VAPA_1c42110
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Entry
VAPA_1c42110 CDS
T02835
Name
(GenBank) putative formate dehydrogenase, subunit FdhC
KO
K00127
formate dehydrogenase subunit gamma
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00630
Glyoxylate and dicarboxylate metabolism
vpd00680
Methane metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VAPA_1c42110
09102 Energy metabolism
00680 Methane metabolism
VAPA_1c42110
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GFIT
Motif
Pfam:
Ni_hydr_CYTB
DUF4405
Motif
Other DBs
NCBI-ProteinID:
AGU51287
UniProt:
T1XED4
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All DBs
Position
1:complement(4474574..4475794)
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AA seq
406 aa
AA seq
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MKQALTALVLLAALGTAFAQAQPPAAPGTTSAPAAPAATAAPEPAAGGIRGQNIFEVKPE
ASADPNYANQTNGERMKVQPGNNAPMWRQVGQGVTGYSSLPKSEAPEAGNLIQPFVQYPG
SRLTNAGEAWRQVRNDWIIPYGAALLFVVLLALAIFYFTRGPIRLHGQETGRKIERFTPF
ERATHWSNAIAFVTLAISGIVMAFGKFFLMPWMGAALFGWIAYALKNVHNFVGPLFVVTM
VFMVFTFIRDNLPRASDLQWLARFGGLFGGKEVPSHRFNAGEKVVFWGGVLFLGFFVIGS
GLFLDKLLPGFVYTRGEMQVAHMVHGIATLLMMAMIMGHIYIGTLGMTGAYKAMRTGYVD
ETWAREHHELWYDDIAAGKIPAQRTVPTDSAAPAARPARPAEGTPS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagcgctgaccgctctcgttcttcttgccgcgctgggtacggccttcgcgcag
gcgcagccgccggccgcccctggaacgacgtccgcacccgcggcacctgccgcaaccgcc
gcgccggagcccgccgcgggcggtatccgcggccagaacatcttcgaggtcaagcccgaa
gccagcgccgaccccaactacgcgaaccagaccaatggcgagcgcatgaaggtgcagccc
ggcaacaacgcgccgatgtggcgccaggtgggccagggcgtgaccggctacagcagcctg
ccgaaaagcgaggcgcccgaggccggcaacctgatccagccttttgtgcagtacccggga
tcgcgcctcaccaatgccggcgaagcctggcgccaggtgcgcaacgactggatcattccc
tacggcgcggcactgctgttcgtcgtgctgctggcgctggccatcttctatttcacgcgc
ggtcccatccgcctgcacggccaggaaaccggccgcaagatcgagcgcttcaccccgttc
gagcgggccacgcactggtcgaacgccatcgcgttcgtcacgctcgcgatctccggcatc
gtgatggccttcggcaagttcttcctgatgccgtggatgggcgctgcgctcttcggctgg
attgcctacgcgctcaagaacgtccataacttcgtcggcccgctgttcgtcgtgacgatg
gtgttcatggtgttcaccttcattcgcgacaacctccctcgcgccagcgacctccaatgg
ctcgcgcgtttcggcggcctcttcggcggcaaggaagtgccgtcgcaccgcttcaatgcc
ggcgagaaggtggtcttctggggcggcgtgctgttcctcggcttcttcgtcatcggctcg
gggctctttctcgacaagctgctgccgggcttcgtctacacgcgcggcgagatgcaggtg
gcgcacatggtccacggcatcgcaaccctgctgatgatggcgatgatcatgggccacatc
tacatcggcacgctcggcatgacaggcgcctacaaggccatgcgcaccggctacgtcgac
gagacctgggccagggaacaccacgaactctggtacgacgacatcgccgcgggcaagatt
cctgcgcagcgcacggtgcccaccgattcggctgcaccggctgcgcggcctgcgagaccc
gccgaaggaacgccctcatga
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