Variovorax paradoxus B4: VAPA_1c42130
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Entry
VAPA_1c42130 CDS
T02835
Name
(GenBank) putative formate dehydrogenase, iron-sulfur subunit FdhB
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00630
Glyoxylate and dicarboxylate metabolism
vpd00680
Methane metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VAPA_1c42130
09102 Energy metabolism
00680 Methane metabolism
VAPA_1c42130
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Gene cluster
GFIT
Motif
Pfam:
Fer4_7
Fer4_11
Fer4_9
Fer4
Fer4_10
Fer4_2
Fer4_6
Fer4_21
Fer4_3
Fer4_4
Fer4_8
Fer4_16
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
AGU51289
UniProt:
T1XG24
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Position
1:complement(4476057..4476680)
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AA seq
207 aa
AA seq
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MARMKFVCDAERCIECNGCVTACKNENEVPWGVNRRRVVTLNDGVPGEKSISVACMHCSD
APCMAVCPVQCFYRTEEGVVLHDKDVCIGCGYCSYACPFGAPQFPSQGTFGVRGKMDKCT
FCAGGPEANGSEAEFEKYGRNRLAEGKLPACAEMCSTKALLAGDGDVVADIFRTRVVQRG
KGAEVWGWGTAYGSQQAGTPPAGGVRK
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaatgaaatttgtctgcgacgcggaacgctgcatcgaatgcaacggctgcgtc
actgcctgcaagaacgagaacgaggtgccctggggcgtgaaccgccgccgcgtggtcacg
ctcaatgacggggtgccgggcgagaagtcgatctcggtggcctgcatgcattgctccgat
gcgccctgcatggccgtgtgcccggtgcagtgcttctaccgcaccgaagaaggcgtggtg
ctgcatgacaaggacgtgtgcatcggctgcggctactgctcgtacgcctgcccgttcggc
gcgccgcagttcccgtcgcaaggcaccttcggcgtgcgcggcaagatggacaagtgcacc
ttctgcgccggcggccccgaggccaacggctccgaagccgagttcgagaaatacggccgc
aaccggctcgccgaaggcaagctcccggcctgcgccgagatgtgctcgaccaaggcgctc
ctggccggcgacggcgacgtggtggccgacatcttccgcacccgcgtggtccagcgcggc
aagggtgccgaagtctggggctggggcaccgcctacggctcgcagcaggctggcaccccg
ccggccggtggagtccgcaagtga
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