Variovorax paradoxus B4: VAPA_1c42340
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Entry
VAPA_1c42340 CDS
T02835
Name
(GenBank) isocitrate dehydrogenase [NAD]
KO
K00030
isocitrate dehydrogenase (NAD+) [EC:
1.1.1.41
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00020
Citrate cycle (TCA cycle)
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01210
2-Oxocarboxylic acid metabolism
vpd01230
Biosynthesis of amino acids
Module
vpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpd_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VAPA_1c42340
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.41 isocitrate dehydrogenase (NAD+)
VAPA_1c42340
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Paralog
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
AGU51310
UniProt:
T1XGP8
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All DBs
Position
1:complement(4498550..4499581)
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AA seq
343 aa
AA seq
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MTTPIPATLIPGDGIGPEIVDATLAALDALKAPFEWDRQIAGLGGVQASGDPLPQATLDS
IRRTRLALKGPLETPSGGGYRSSNVRLREEFQLYANLRPARTIIPGGRFDKIDLMVVREN
LEGLYIGHEHYVRIDGDPHAVGMATGINTRQGCLRVLEYAFETAIATGRKKVTLVHKANI
MKVLTGLFLETGLRLYEEKYKGKFELDTIIVDACAMKLVLNPWQFDMLVTTNLFGDILSD
LVAGLVGGLGMAPGANIGADAAIFEAVHGSAPDIAGKGIANPTALLLAAALMLEHVRLPE
MATRLRKAIDDTLNIDKVRTGDLGGSAGTAAFTKALVSRIQNG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccccattcccgcaaccctgattcccggcgatggcatcggccccgaaatcgtc
gacgccaccctggccgcgctcgatgcgctgaaggcgcccttcgagtgggaccgccagatt
gccggcctcggcggcgtccaggcctcgggcgatccgctgccgcaggccacgctggacagc
atccgccgcacccgcctggccctcaagggcccgctcgagacgccctcgggcggcggctac
cgctcgtcgaacgtgcggctgcgcgaggagttccagctctatgccaacctgcgtcccgcg
cgcaccatcattccgggcggccgcttcgacaagatcgacctgatggtcgtgcgcgagaac
ctcgaaggcctgtacatcggccacgagcactacgtgcgcatcgacggcgacccgcacgcc
gtcggcatggccaccggcatcaacacgcgccagggctgcctgcgcgtgctcgaatacgcc
ttcgagaccgctattgccacgggccgcaagaaggtcacgctggtgcacaaggccaacatc
atgaaggtgctgaccggcctgttcctcgagaccggcctgcggctctacgaagaaaagtac
aagggcaagttcgagctcgacaccatcatcgtggacgcctgcgcgatgaagctggtgctc
aatccatggcagttcgacatgctggtgacgaccaacctgttcggcgacatcctgtccgat
ctggtggcgggtctggtgggtggcctgggcatggcgcccggcgccaacatcggcgccgat
gcggcgatcttcgaggccgtgcacggctcggcacccgacatcgccggcaagggcatcgcc
aaccccacggcactgctgctggccgccgcgctgatgctagagcacgtcaggctgcccgag
atggccacgcgcctgcgcaaggccatcgacgacacgctcaacatcgacaaggtacgcacc
ggcgacctgggcggcagcgccggcacggcggcgttcaccaaggcgctggtcagccgcatt
caaaacggctga
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