Variovorax paradoxus B4: VAPA_1c42350
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Entry
VAPA_1c42350 CDS
T02835
Symbol
metG
Name
(GenBank) methionine--tRNA ligase MetG
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00450
Selenocompound metabolism
vpd00970
Aminoacyl-tRNA biosynthesis
vpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VAPA_1c42350 (metG)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VAPA_1c42350 (metG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpd01007
]
VAPA_1c42350 (metG)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpd03016
]
VAPA_1c42350 (metG)
Enzymes [BR:
vpd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
VAPA_1c42350 (metG)
Amino acid related enzymes [BR:
vpd01007
]
Aminoacyl-tRNA synthetase
Class I (U)
VAPA_1c42350 (metG)
Transfer RNA biogenesis [BR:
vpd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VAPA_1c42350 (metG)
Prokaryotic type
Other AARSs
VAPA_1c42350 (metG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
Anticodon_3
tRNA-synt_1f
tRNA-synt_1e
Anticodon_1
Motif
Other DBs
NCBI-ProteinID:
AGU51311
UniProt:
T1XFL3
LinkDB
All DBs
Position
1:4499838..4501934
Genome browser
AA seq
698 aa
AA seq
DB search
MSATRKLFVTTALPYANGKFHIGHMMEYIQADIWVRNQRMNGAEVNFVCADDAHGAAITI
AADKAGVTPQAFVAEIAAGRKPYLDGYYISFDNWHSTDAPENHQLAQDIYRDLRANGLIE
TKSVEQFYDPAKGMFLADRFIKGECPNCHSKDQYGDNCEVCGAVYAPTELINPYSALSGA
KPELRSSDHFFFKLSDPRCEAYLKEWTAAPGHVQSEVQNKIREWLYKDDEGKGGLGDWDI
SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRCIELAGDGISYTEYMADPDL
EQVHFIGKDIITFHTLFWPAMLHFSGRKAPDAVYVHGHLTVSGEKMSKSRGTGIDPLRYL
SIGLDPEWLRYYIAAKLNGRNEDIDFNPEDFVARVNSDLVGKYINIASRAAGFIGKRFGG
RLGEVSADGDALLFALRDAAPQLHSLYDGRDYARALREVMALADKVNEYVDQNKPWELAK
KEGQEARLHDVCTVCIEAFRLLTLYLKPVLPALAVNVEAFLGIEPLTWADAAQSLPTGHA
IGEYKHLMQRADAKMVDQLFEPDEPAPAAAVETATDALPGGEAIAPTITIDDFAKIDLRI
AQIVACEKVEGSTKLLRLTLDAGEGKTRNVFSGIASAYQPEQLVGKLTVLVANLAPRKMK
FGLSEGMVLAASHGDEKANPGIHVLEPWPGATPGMRVR
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacgcgcaagctcttcgtcaccaccgccctgccgtatgccaacggcaagttc
catatcggccacatgatggaatacatccaggccgacatctgggtgcggaaccagcgaatg
aatggcgccgaggtcaacttcgtctgcgccgacgacgcgcacggcgcggccatcaccatc
gcggccgacaaggccggcgtgacgccgcaggccttcgtggccgagatcgcggccggccgc
aagccgtatctcgacggctactacatctcgttcgacaactggcactcgaccgatgcgccc
gagaaccaccagctcgcgcaggacatctaccgcgacctgcgcgccaacggcctcatcgaa
accaagagcgtcgagcagttctacgaccccgccaagggcatgttcctggccgaccgcttc
atcaagggcgaatgccccaactgccactcgaaggaccagtacggcgacaactgcgaggtg
tgcggcgccgtgtacgcgcccaccgagctgatcaacccctactcggcgctgtcgggcgcc
aagcccgagctgcgcagctccgaccacttcttcttcaagctctcggacccgcgctgcgag
gcctacctgaaggaatggaccgccgcgccaggccacgtgcagtccgaagtgcagaacaag
atccgcgagtggctctacaaggacgacgaaggcaagggcggcctcggcgactgggacatc
agccgcgacgcgccctacttcggcatcgagattcccgatgcgccgggcaagtacttctat
gtgtggctcgacgcgcccgtgggctatctggcgtcgctgaagaacctgctcgacaagcgc
tgcatcgagctcgccggcgacggcatctcgtacaccgagtacatggccgaccctgacctg
gagcaggtgcatttcatcggcaaggacatcatcaccttccacaccctcttctggcccgcg
atgctgcacttcagcggccgcaaggcgcccgacgcggtgtacgtgcacggccacctcacg
gtcagcggcgagaagatgagcaagagccgcggcaccggcatcgacccgctcaggtacctc
tcgatcggcctggaccccgaatggctgcgttactacatcgcggccaagctcaacggccgc
aacgaggacatcgacttcaaccccgaggacttcgtggcgcgcgtcaacagcgacctcgtg
ggcaagtacatcaacatcgcgagccgcgcggcgggcttcatcggcaagcgcttcggcggc
cggctgggcgaggtgtcggccgacggcgacgcactgctgttcgcgctgcgcgacgcggcg
ccgcagctgcattcgctctacgacggccgcgactacgcccgcgcgctgcgcgaggtgatg
gcgctggccgacaaggtgaacgagtacgtcgaccagaacaagccctgggagctggccaag
aaggaaggccaggaggcccggctgcacgacgtgtgcacggtgtgcatcgaggccttccgc
ctgctcacgctgtacctgaagccggtgttgccggcgctggcagtgaacgtcgaggccttc
ctcgggatcgagccgctcacgtgggcggatgccgcgcagagcctgcccaccggccacgcc
atcggcgagtacaagcacctgatgcagcgtgccgacgccaagatggtcgaccagctgttc
gaacccgacgagccggcgcctgctgccgccgtggaaacggcgaccgatgcactgccgggc
ggcgaagcgatcgcccccaccatcaccatcgacgacttcgcgaagatcgacctgcgcatc
gcgcagatcgtggcctgcgagaaggtcgagggctcgaccaagctgctgcgcctgacgctc
gacgcgggcgagggcaagacgcgcaacgtgttcagcggcatcgcctcggcctaccagccc
gagcagctcgtgggcaagctcacggtgctggtcgccaacctggcgccgcgcaagatgaag
ttcggcctcagcgaaggcatggtgctggcggcgagccatggcgacgaaaaagccaacccc
ggcatccatgtgctcgagccctggccgggcgcgacgccgggcatgcgcgttcgttga
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